Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00141 ATGGCTATTTTTTGTGCACTACCATGGTTCACATTTTTTCTGGTTTTGAGTACTGTACTGCATTTCATGAGAAAGACCAAAAAAGAGAGACATATCAAACACCTTCCTCCTAGCCCACCAAAGCTCCCCATTATTGGCAACCTGCAACAACTGGGTGCACTACCCCATTGCTCTCTGTGGAGACTATCCCAAAAACATGGCCCAGTTATGATGCTCAAACTAGGATCCATACCAACTGTTGTGGTCTCCTCTGCAGCAGCAGCCAAAGAGGTCTTAAAAGATCATGATCTTCAGTGCTGCACTAGGCCTGTCATGGCTGCACCTCGTAGAATTTCTTACAATTATCTCGATGTTGTCTTTTCTCCTTATGGTGATAACTGGAGGGACATGAGGAAAATTTGTGTACTTGAGCTACTTAATTCTAAAAGGGTTCACTCATTTAGTTGCATCAGAGAAGAACAACTCCGCTCCATGGTTGATATGATCTCTCAAGCCTCATTGTCTGGGATTCCTGTAAATCTCAGTGAGAATTTGTTCTTTGTTACTGCAAATATAACTTGTAGAGTTACCACTGGAAAAAGCTTTCAAGATAACGAACTCAGTTATGGTAACATCAAAAACTTTACTCAAGAGGCTTCTGCTTTGTTGCAGAGTTTTTGTGCATCAGATTTCTTTCCACGTGTGGGGTGGCTTCTTGATAGGCTGACAGGTTTCCATGATAAACTTGAAAGGGCTTTCCATAACTTCGATGCTTTTTACCAGCAAATCATGGATCAACATGTCAGTGTTAAGAGAACAAATGATGATGAACCAGAACACATAATTGATGTGTTGTTCAAAATAGTAGCAAATCAAAGTGATTGTGATGTAGTCCAGATCACTGACAACCACATCAAAGCAATCCTCATGAACATATTTTTGGCTGGGGTAGACACCACTGCCGCCACTACAATATGGTCAATGGCTGAGCTCATTAGGAACCCCAGAGTGATGAGAAAAGTACAAGATGAAATAAGAACATGGGTTGGCAATAGGGGAAGGATTGTCGAAGAGGACATGGAGAAACTGAGTTACCTACAAATGGTGGTGAAAGAAACCCTAAGATTACACCCTGCTGGTCCACTTTTACTTGCAAGAGAAGCCATGAGTGCATTTAAGATCAATGGTTATGACATATCCGAAAAAACACGCATCCAAGTCAATGTTTGGGCCATAGGTAGAGATCCACACGTCTGGGAATTCCCACAAGAGTTTGTCCCAGAGAGATTTGAAGATGTTGATGTTGATTATAAAGGACAACATTTTGAACTTCTACCCTTTGGCAGTGGTCGTAGAGGGTGTCCTGGAATTTACATGGGAATAACCATGGTGAAGTTGGAACTTGCCAATCTTCTGTACTACTTTAACTGGAAGTTACCACATGGAATTCAGTATGTTGACATGGATGAAGGATCAGGTATTAGTGTCCACAAGAAAAAAGCTTTGAACCTTGTACCTCTCCGCTATCACTGTCCCTAG 1518 0.415 MAIFCALPWFTFFLVLSTVLHFMRKTKKERHIKHLPPSPPKLPIIGNLQQLGALPHCSLWRLSQKHGPVMMLKLGSIPTVVVSSAAAAKEVLKDHDLQCCTRPVMAAPRRISYNYLDVVFSPYGDNWRDMRKICVLELLNSKRVHSFSCIREEQLRSMVDMISQASLSGIPVNLSENLFFVTANITCRVTTGKSFQDNELSYGNIKNFTQEASALLQSFCASDFFPRVGWLLDRLTGFHDKLERAFHNFDAFYQQIMDQHVSVKRTNDDEPEHIIDVLFKIVANQSDCDVVQITDNHIKAILMNIFLAGVDTTAATTIWSMAELIRNPRVMRKVQDEIRTWVGNRGRIVEEDMEKLSYLQMVVKETLRLHPAGPLLLAREAMSAFKINGYDISEKTRIQVNVWAIGRDPHVWEFPQEFVPERFEDVDVDYKGQHFELLPFGSGRRGCPGIYMGITMVKLELANLLYYFNWKLPHGIQYVDMDEGSGISVHKKKALNLVPLRYHCP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00141 505 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 FunFam Cytochrome P450 83B1 22 498 - -
Pte4g00141 505 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 CDD CYP71-like 65 495 - -
Pte4g00141 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Pte4g00141 505 Gene3D Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PANTHER CYTOCHROME P450 71B11-RELATED 16 500 - -
Pte4g00141 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00141 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00141 Pte-Chr4 3162384 3164331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00141 9 506 Cytochrome P450 AT3G26300 50.400 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00141 - K01773 qsa:O6P43_023144 603.208