Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00137 ATGACTTCGGTCGTTGTGGTCGACGGTGAAAACCTTGAACACAGCTTTGCCGATTTTTCAATTAAACATCAGGATCAGAATCAGAATCAGATTGGAACACTGGATGCAGGAGAAATTCAGGAGATGGGAGGTGGGCGTGGTTACCACGGGGGAACTTGTGCAATATGTCTGGATAAGATAGTGCTTCAGGATACTGCTCTAATAAAAGGTTGCGAACATGCGTACTGTGTGACTTGCATTCTGCAATGGGCGACCTACAGAAAGGAGCCAACCTGCCCACAGTGCAAACATCCATTTGAGTTCCTCAATTTACATCGGTCTCTTGATGGCAGCCTTCACGATTACATGTTCGAGGAGAGTGTTTGCCTTCTTCTGAGGGCATCATGGTTTAAACCTTTAGCTGTGGAAGATCATAAGCATGAAGATGATGACTTCTTTGATTATATCGATGAGTATTATCCGTATGAAGAGGATGGTGATGTAGACGATGATGAAGTCTATTATTGTGGCTCTTCAAGCATAAGGATTGGAAATAGGAGATGGGGTGATAACGGCTATGTGAGGGCTGGACGTCTAGAAGCAAGGCCAGTCTATCGACCTAACTTGGAAGATGAAGGTGCTGGTTCCTCCCGTGATTCAAGGAAGAAAGAGGTGTCAAAAACAACATCAGGGCGACGAGCAAAGCGGGCAATGAAACGTGAGGCAGCTGATAAAGCAGCTGCAGCAAAACATGAGAAGCATTTGGCAAGGCTGGGTCGCTGCAAGTGA 768 0.4596 MTSVVVVDGENLEHSFADFSIKHQDQNQNQIGTLDAGEIQEMGGGRGYHGGTCAICLDKIVLQDTALIKGCEHAYCVTCILQWATYRKEPTCPQCKHPFEFLNLHRSLDGSLHDYMFEESVCLLLRASWFKPLAVEDHKHEDDDFFDYIDEYYPYEEDGDVDDDEVYYCGSSSIRIGNRRWGDNGYVRAGRLEARPVYRPNLEDEGAGSSRDSRKKEVSKTTSGRRAKRAMKREAADKAAAAKHEKHLARLGRCK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00137 255 Pfam Ring finger domain 52 96 IPR001841 -
Pte4g00137 255 SMART ring_2 53 95 IPR001841 -
Pte4g00137 255 ProSitePatterns Zinc finger RING-type signature. 71 80 IPR017907 -
Pte4g00137 255 MobiDBLite consensus disorder prediction 200 247 - -
Pte4g00137 255 CDD RING-HC_Topors 52 99 - -
Pte4g00137 255 ProSiteProfiles Zinc finger RING-type profile. 53 96 IPR001841 -
Pte4g00137 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 116 IPR013083 -
Pte4g00137 255 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 12 253 - -
Pte4g00137 255 MobiDBLite consensus disorder prediction 200 255 - -
Pte4g00137 255 SUPERFAMILY RING/U-box 52 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00137 Pte-Chr4 3119659 3123382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00137 1 253 C3H Transcription Factor Family AT5G19430 51.894 1.06e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00137 - - qsa:O6P43_014716 301.212