Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00134 ATGGCAGAATCGAGTGAACCACATTCAGGGAGAAATAAGGCTTCTCAGGAGAAATATAAGAAAAGACAGCACAAGACACCAGCCCAGCTGAATGCACTAGAGAAATTTTACAATGAACATAAATATCCCACAGAAGAGATGAAATCAGATCTTGCTGTGGAGCTAGGTTTGTCAGAAAAGCAAATATCTGGATGGTTTTGTCATAGAAGATTAAAAGACAAAAAGTTAAGAGATGAAGTGCATGGTAGTGGAAGGCAAGACCGTTCTAGTGGAGTCATCCAGGATCGTGAGTTTGGGCAAGATTCATGCGGAAGCACTAAACATGGTGATTATAAGCATTTTGATCCTAGAGAAGTTGATAGCCATGTCGTTTTCGACGGTGGTTCTCCTGCAATGGATCCGACTTATGATCACAGGAGTAATCCTTATACAGAAAATGTTTGTGGGATGGATAATACATCTTCCGAGAGTAGCTCATTTTTACAAGACAAATTACGTTATGAAATGCCAAACCCGTATAATATGATACCTGCTAGATACTTGAAAAATGATGGAGATTTGCCACCAATAAATTCCATGGGTCGAAGTAACTTGGGATATAAACCCTCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCAGCTATAACTGCTGTGAAGAAGCAATTGGGTAGGAATTATAGGGAGGAAGGTCCGTTGCTTGCTGTAGAATTTGATCAACTTCCTCCTGGCGCGTTTGAGTCTGCAGTTGCAAACCCCATCCATGAATCATATTATATTGAGAATCCTACTGTTCCTGATCCGACTGACATTTCTGCAGCAAACAGGGAACCCAATCTTAGCTCAAGATATGAGTATAATGCCAAGTATAGTTCCAATGAACTACCTGTGGGAGGTGAGAACCTGATAGCTGACACCGATTTCCAGGAAAATAAGCCTCATCAGCGTATAAAGAAAAGGTCCCCTTTTCTCAATCAAACGGATCCTTTCCCTGGAATGAACTCTTCTAATTTGTATGAAGATACTATGAGATATGAATCTGGTTTCAATAGCAAAAGAGGTCGTGGAATGAGCTCTAAGCACAGTATTGATGGAATGAGATCTGACTCTGCTTCTTACAGTAGTGGTCACCATTATGGAGAAAAGGCTGGCACTGAGCAGAGGGAGCCTTTGTTACATGGCTATGATGATGCCAACATAAAAATAAGAGGCAAATTTACAAAACTCAAGCCTTCAAGTTTAATACATCGTCGTCGTGTTCCAGTTGATATGGAAGATAGAGGAAGATCTTTGTGGATAGAGAAGGACAGTTTTAGTGGGGAGAGGAAGGGTATGAAAGTCTGTGACGATTCAGTTAAAGGAAGAAAGCATCTAACAAATGAAAGTAAGGTCGCTAAACTCGGTAAATTCGGTATTCCTCCTCAAGATTGGATAAAACAAATACCTGCCACTGACTTACCACCCCTGCAGAAACTGAGATCCGCCATGGAGATGCCTACTAGCTTTAGTGAAGATGAAACTGCAGAAATCAGTTCTTCTTCGGATTGA 1551 0.4081 MAESSEPHSGRNKASQEKYKKRQHKTPAQLNALEKFYNEHKYPTEEMKSDLAVELGLSEKQISGWFCHRRLKDKKLRDEVHGSGRQDRSSGVIQDREFGQDSCGSTKHGDYKHFDPREVDSHVVFDGGSPAMDPTYDHRSNPYTENVCGMDNTSSESSSFLQDKLRYEMPNPYNMIPARYLKNDGDLPPINSMGRSNLGYKPSGYLKVKGEIENAAITAVKKQLGRNYREEGPLLAVEFDQLPPGAFESAVANPIHESYYIENPTVPDPTDISAANREPNLSSRYEYNAKYSSNELPVGGENLIADTDFQENKPHQRIKKRSPFLNQTDPFPGMNSSNLYEDTMRYESGFNSKRGRGMSSKHSIDGMRSDSASYSSGHHYGEKAGTEQREPLLHGYDDANIKIRGKFTKLKPSSLIHRRRVPVDMEDRGRSLWIEKDSFSGERKGMKVCDDSVKGRKHLTNESKVAKLGKFGIPPQDWIKQIPATDLPPLQKLRSAMEMPTSFSEDETAEISSSSD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00134 516 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Pte4g00134 516 SMART HOX_1 18 80 IPR001356 GO:0003677
Pte4g00134 516 MobiDBLite consensus disorder prediction 76 94 - -
Pte4g00134 516 SUPERFAMILY Homeodomain-like 8 76 IPR009057 -
Pte4g00134 516 MobiDBLite consensus disorder prediction 351 384 - -
Pte4g00134 516 MobiDBLite consensus disorder prediction 76 113 - -
Pte4g00134 516 Coils Coil 512 516 - -
Pte4g00134 516 Gene3D - 9 91 - -
Pte4g00134 516 MobiDBLite consensus disorder prediction 1 31 - -
Pte4g00134 516 MobiDBLite consensus disorder prediction 496 516 - -
Pte4g00134 516 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 516 - -
Pte4g00134 516 MobiDBLite consensus disorder prediction 10 28 - -
Pte4g00134 516 MobiDBLite consensus disorder prediction 497 516 - -
Pte4g00134 516 CDD homeodomain 20 75 IPR001356 GO:0003677
Pte4g00134 516 Pfam Homeodomain 20 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00134 Pte-Chr4 3027724 3036476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00134 2 517 Homeobox Transcription Factor Family AT4G03250 37.956 2.52e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte4g00134 Homeodomain 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00134 - - qsa:O6P43_020989 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00134 4 3027724 3036476 Pte4g00134 4 3027724 3036476 RCT