Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00130 ATGTTTGACTTCAACATATTTATCCTCTTCCTCTTATCCATTTCATGTTCCCTCACATTTTTCTTCCTCGTTACTTCTCATAATCGCAATTCAAAGAGATTCAAGAGCAAGACCCCATGTCCACAATCCTATCCTATCCTGGGAAACCTCGTAGCTCTCCTGAAAAACCTTCATCGTTTTCAGGATTGGATCGCTGACATGCTTTCTGAAACCCCAACTTCCACCATCCGAGTCAACAACTTCCTCAACCTCTCCCAGGGTATCTGCACTGCCAATCCCGCAAACGTTGAGCACTTACTTTACTCAAATTTCCATAACTACATCAAAGGCTCTCGCTTTCGCGTTGGTTTCCACGAACTCCTTGGTGATGGCATCTTTGCTGTAGATGGCCAGCTCTGGAAACTCCAACGCAAGATTGCCAGCCATGAATTCAACACTAAATCACTCAAACTTTTCACTTCTGACACGGTTAGCTTTCAAATCGGTCAATGCCTCCTTCCTTATCTCTCTTCAGCTGAACTCAACGACCAGGTGATTGACCTTCAAGACGTTTTGCTGAAGTTCAGTCTTGATAATATACTTAAGGTGGCTTTTGGGGTTGACCCTTCATGTTTAGTTGTATATAACGACAACTCAAATAGTATCCTCGAATTCGTCAAAGCTTTCGACTTCGCAGTTGAAATTGGATTTTTGAGGTATATTTCACCTATTCCGGCAATATGGAAATTGAAAAGATTGTTCAATTTAGGGAGTGAGAAACAGTTCAAAGAAGCTATTGCTGTGATTAACAGTTTTGCCATGGAGATCATAATGTCTAGAGAAGAACAAAAAGAGCAAACTCAGCTGAACCAAGATCTTTTGTCAAGGTTTATATTCTCAGAATCTGACGCTCTTGTGTTTGATCATGACCAACATCTTCGTAGGAGGTTCTTGAGGGACATTGTCATAAGCTTCATTCTTGCTGGTAAGGACACCACTTCCACTGCTTTGACTTGGTTTTTTTGGTTATTAGCTGGGCATCCGCATGTGTCGGAGCGGATACGTGAAGAAATTTCTTCCGTGGCGGCAACCGCGGAGGAGGGCAAGTCAGTGGTTGTGTTTAGTTATGAGCAATTAAAGAAGTTGAATTATCTACAAGCAGCCCTATCAGAGTCCATGAGGTTGTTTCCACCTGTGCCAATAGACACTAGGTTAGCGGTGAATGATGATGTGTTACCTGATGGGACTCAAGTGAGATCAGGTTGGTTTGTTGATTATTCAGCATATGCAATGGGGAGGATGGAAAAGATTTGGGGGAGTGATTGCAAGGATTTCAAGCCAGAGAGGTGGTTGAATGAGCAGGGAGTGTTTCAAGCTTGTGATCAATATAGGTACCCAGTGTTTCATGGAGGACCAAGGATTTGTTTGGGAAGTGGGATGGCTTATGTGCAGATGAAGTCTGTTGTCGCAGCAGTGATGAATGAGTTTGAGATTGAAGCCGTTGACGGGGGTGGGACAGCTGAGAAGATGACGCATCCTCCTTTTATGTTGTCAATGATACTGAAGATGAGAGGGGGGTTGCCTGTTAAGCTAAGGAGGAGGTCCAAGACCAAGAGCAAAGCAGAAAAGATCACAACACCAAGTCCTGGGGTTCAACTTTGA 1641 0.4351 MFDFNIFILFLLSISCSLTFFFLVTSHNRNSKRFKSKTPCPQSYPILGNLVALLKNLHRFQDWIADMLSETPTSTIRVNNFLNLSQGICTANPANVEHLLYSNFHNYIKGSRFRVGFHELLGDGIFAVDGQLWKLQRKIASHEFNTKSLKLFTSDTVSFQIGQCLLPYLSSAELNDQVIDLQDVLLKFSLDNILKVAFGVDPSCLVVYNDNSNSILEFVKAFDFAVEIGFLRYISPIPAIWKLKRLFNLGSEKQFKEAIAVINSFAMEIIMSREEQKEQTQLNQDLLSRFIFSESDALVFDHDQHLRRRFLRDIVISFILAGKDTTSTALTWFFWLLAGHPHVSERIREEISSVAATAEEGKSVVVFSYEQLKKLNYLQAALSESMRLFPPVPIDTRLAVNDDVLPDGTQVRSGWFVDYSAYAMGRMEKIWGSDCKDFKPERWLNEQGVFQACDQYRYPVFHGGPRICLGSGMAYVQMKSVVAAVMNEFEIEAVDGGGTAEKMTHPPFMLSMILKMRGGLPVKLRRRSKTKSKAEKITTPSPGVQL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00130 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Pte4g00130 546 PANTHER CYTOCHROME P450 24 521 - -
Pte4g00130 546 CDD CYP86A 81 520 - -
Pte4g00130 546 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 Gene3D Cytochrome P450 21 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 SUPERFAMILY Cytochrome P450 39 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 Pfam Cytochrome P450 39 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00130 546 MobiDBLite consensus disorder prediction 525 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00130 Pte-Chr4 2863855 2873626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00130 42 528 Cytochrome P450 AT3G56630 46.626 5.17e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00130 - - cave:132164303 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00130 4 2863855 2873626 Pte4g00130 4 2863855 2873626 RCT