Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00120 ATGAAGAGTACTTCTCAAAGAACTGGGGCGAGGCAATACCACAAATCTGAACTTCCAAGGCTGATATGGAGTCATGAGCTTCATCAACAGTTCGTTGGAGCTGTGGAAAGCCTTGGCGGTAAAGACAAAGCAACTCCAAAGAATATCTTGCAGATGATGGAAGTGAAAGGACTGAAAATCTCCCACATCAAAAGCCATCTTCAGATGTACAGAAACATGAAAGAAAAAAGACACATTAGAGCTCTGAGAAAAGTTACTCGTAATTTGTCAAAGGAAAGAGACCTTAACGTTAATCTTCTGGATAACAAATTCTGCTCCAGGCGTGGAGTTTTTTTTGGATTTATTGAAGGATCCTCACAATCAACCCAAGGAAGTGATCTTAATCCTGATCAGGTGTTGAGTTCAAACACATGCATATCAAGTAGAACATGGAATGAAGAAGCAGATAGCAATGAGACAGTTGATTTTTGTAGACTCTCGCTATCCTTCGGTGGCTCTCCTGCTCTTCCCACGCTGACGGAGGAGAGATCCACAGCTCATCCATGTCTGAGTTCAGAAGACTATCAGGCAATGGAATCTGATGCTACCATAAACCTAAATAGCCAATCATTCAGGAACACTGACATAAACTTAGACCTAAGAATATAA 648 0.412 MKSTSQRTGARQYHKSELPRLIWSHELHQQFVGAVESLGGKDKATPKNILQMMEVKGLKISHIKSHLQMYRNMKEKRHIRALRKVTRNLSKERDLNVNLLDNKFCSRRGVFFGFIEGSSQSTQGSDLNPDQVLSSNTCISSRTWNEEADSNETVDFCRLSLSFGGSPALPTLTEERSTAHPCLSSEDYQAMESDATINLNSQSFRNTDINLDLRI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00120 215 SUPERFAMILY Homeodomain-like 19 76 IPR009057 -
Pte4g00120 215 Gene3D - 18 76 - -
Pte4g00120 215 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Pte4g00120 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pte4g00120 215 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 116 IPR046955 GO:0003700
Pte4g00120 215 FunFam Two-component response regulator 14 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00120 Pte-Chr4 2700607 2702741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00120 10 74 G2-like Transcription Factor Family AT2G42660 60.000 1.75e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte4g00120 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00120 - - gmx:100791958 140.969