Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00112 ATGGCATCAAAGAAAACAGAGATCATATCCGTAACCACAATCAAGCCTTCTTCACCCACTCCACCTCACCTTCAAACTTTCAAACTCTCACTTCTAGACCAGCTCACCTCCAATGACTATGGTAATCTCACCTTTTTCTATCCCTATAACAATGCTGCCTCATTCATTAATGGTTCTAGCGAACACCATCGTCATCATAATGATTCTGCTAATTGTTACTATTCCAACTCCAAACTTCTTCAAAAAGCTTTGTCTGAAACTCTAACTCATTTCTATCCTTTGGCTGGGAGATTGCAAGATGATAGCACCATCGCTTGCAATGATGAAGGTGTTGTCTTCACCGAGTCCAAAACCAATTATTTTCTTTCTGACATTTTGGCATCTCCTGACTTGGACCTTATTTATAATGAGTTTAACTCAATAAACCATCGTGAAGCCATGCAGGTACCTAATGCACCTATGATACTCTTCAATTTCGTACTGTTTGGCTGTGGTGGCACTGCTGTGAGTTTGGCAGCATCACACAAAGTATTTGACATGTTTTCCTTGATAACATTCCTCAAAAGTTTAAGTGCAGCTTGTTCTGGATCTGCTGAACTCATTGTCCCAGATTTTCATGCTGCACCAACCCTCTTCCCATCAAGACAGATGCCAAATCATGCATCATTTTCTAGTACACGAAAGATTAAAGCGATAAGTTTCGTGTTCACTGCATCAAAAGTCCAAGAGCTCAAAACTATGGCTGCAAACGGCCTTAAGGAAGAAGGTTATGAATTTGGTTACCTTTCTCGTGTGAATGTTGTGATGGCATTCCTTTGGAAATGCCTTGCAACCATTTCCATATCCCAAAAAGGTTTCTTCAGACCAATTGTGATGGTACAAGCAGCTAATCTCCGAAACCGAATTGGACAGCCATTGCCCTCTAATGCTATGGGGAACCTTTCATTCACCTATGCCACAGACATAGTTAAAAAGGAGAATGATGTTCAATTCATTGAGTTGCTCAAGAGGCAGTTGGAGTTGAAAGTTTCAATTGATGAGAAGGCCAAAAGGTTCAACGCACACGAAGCAGTTCGAGCATCGACAGAAGAAATTGGAGTGCTATTCAGTAACAGCGATCAACTGAACCTTTACACTGCCTCAAGTTGGTGTAGGTTTGAATTTTATGAAATGGATTTTGGAATGGGCAAGCCAATTTGGATGACATTTATGTTTCCAGGATTCCAGACAAATAATATTACTTTATTGGACACAGAAATGGAGGGTAAAGATGAACATGGATGGAGTTTGAAAATTCATATTGATGTTTGA 1311 0.4012 MASKKTEIISVTTIKPSSPTPPHLQTFKLSLLDQLTSNDYGNLTFFYPYNNAASFINGSSEHHRHHNDSANCYYSNSKLLQKALSETLTHFYPLAGRLQDDSTIACNDEGVVFTESKTNYFLSDILASPDLDLIYNEFNSINHREAMQVPNAPMILFNFVLFGCGGTAVSLAASHKVFDMFSLITFLKSLSAACSGSAELIVPDFHAAPTLFPSRQMPNHASFSSTRKIKAISFVFTASKVQELKTMAANGLKEEGYEFGYLSRVNVVMAFLWKCLATISISQKGFFRPIVMVQAANLRNRIGQPLPSNAMGNLSFTYATDIVKKENDVQFIELLKRQLELKVSIDEKAKRFNAHEAVRASTEEIGVLFSNSDQLNLYTASSWCRFEFYEMDFGMGKPIWMTFMFPGFQTNNITLLDTEMEGKDEHGWSLKIHIDV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00112 436 Pfam Transferase family 5 433 - -
Pte4g00112 436 Coils Coil 322 342 - -
Pte4g00112 436 Gene3D - 228 435 IPR023213 -
Pte4g00112 436 PANTHER F21J9.9 7 422 - -
Pte4g00112 436 Gene3D - 3 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00112 Pte-Chr4 2398073 2413106 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00112 76 407 Monolignol Biosynthesis Gene Families AT5G48930 24.324 1.03e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00112 - - qsa:O6P43_014533 314.694