Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00110 ATGATTGAAGGAGAGACTGAAATATTGTCAAAGACTCTCGTCAAACCTTCTATTCCAACGCCCCACCAACTCAAAATCCACAAAGTTAGTCTTCTAGATCAACTCTCCCCTAACCTTCACAATGTTTTTACCTTCTTCTACCATAAAGATTTCAAATTTTCCAATGGCAACTACATGTCAACATTCTCAAAAAGGTCTCAGCTTCTTCAAAAATCGCTCTCTGAGACTCTCTCTCTCTTCTACCCTTTTGCCGGAAGATTCAAAGATGATGCCACCATCTTGTGCAATGACGATGGTGTTGTCTTCTTTGAAGCCAAGACTCAGATACGTCTCTTTGACATCCTCTCCCATCCGGACTTGGACGCTATAGGCTCTCACTTCCTTTATGCTACTAGCGACTTCAAACACAAAACACAACTGCAACGTCCCATGGTACTAATTGGGTTCACCTTGTTTGGATGTGGAGGCACTGCCTTGAGCATTTGTATCACTCACAAGAATGCTGACTTTGCATCAGTGGTCACACTGTTACAGTGCTGGACTGCTGCTTGTAGAGGAGCCAAGCAAATTGTAGTACCGGACTTGAACATAGCAGCATCACACATACCACCGAGAGTAATCTCCGGCATATCAGAATCTGTGGTTCTCAGTACCAAGAAGATTGCTGCAAGGAGGCTCGTCTTCACCGCATCCAAGATTACAGAACTCAAAGCTAAGGTATTAAGTGAATCTGGAGGTGGGTTGAAACGTTATCCTTCACGAGCTGACGTTGTGACGGCGGTCATATTGAAATCTGCTATGGCAGCTTTCGTACATAAAATGGGGAAGTTTAAGCCAACAGTGCTGATGCAAGCTGCAAACCTCAGAACTCGAATGGATCCACCTCTACCTGAAAATTCAATTGGGAATCTGGCTTGGCTATTCCCAGTGATGGTAGAGAATGAGAGTGAAATGGAAATGTACGAGTTGGTAAAGAAGATGATAGCCTTGAAAGCATCTCTCAAGAACAAGGTGAATAAATTTAGTAGTGAAACCATTGTTGAAGCTGTGAAGGAGGGACTGGAAGAAAGAGAACAATTTCTTAAAAATGATAAGCATCATGCTGTTTATCTCTGTGCCAGCTGGTGCAAGTTTCCAATGCTGGAACTTGATTTTGGTTGGGGAAAACCAATGTGGGTGCCTTGCATTGGAAAAGCTAATCTAATGGGAAATACCATACATTTGCTTGATACAAAAATAGCTGGTGAAGTTGAGGCATTGGTATATCTTGAGGAGGATGAAATGGATATGTTCCAACACAACGCAGAGCTGCTTCAATATGCTTCCATTAATCCTAGTATTACTTACATTCGTCCAAACTTGTAA 1365 0.4242 MIEGETEILSKTLVKPSIPTPHQLKIHKVSLLDQLSPNLHNVFTFFYHKDFKFSNGNYMSTFSKRSQLLQKSLSETLSLFYPFAGRFKDDATILCNDDGVVFFEAKTQIRLFDILSHPDLDAIGSHFLYATSDFKHKTQLQRPMVLIGFTLFGCGGTALSICITHKNADFASVVTLLQCWTAACRGAKQIVVPDLNIAASHIPPRVISGISESVVLSTKKIAARRLVFTASKITELKAKVLSESGGGLKRYPSRADVVTAVILKSAMAAFVHKMGKFKPTVLMQAANLRTRMDPPLPENSIGNLAWLFPVMVENESEMEMYELVKKMIALKASLKNKVNKFSSETIVEAVKEGLEEREQFLKNDKHHAVYLCASWCKFPMLELDFGWGKPMWVPCIGKANLMGNTIHLLDTKIAGEVEALVYLEEDEMDMFQHNAELLQYASINPSITYIRPNL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00110 454 Gene3D - 5 209 IPR023213 -
Pte4g00110 454 Pfam Transferase family 7 437 - -
Pte4g00110 454 Gene3D - 218 442 IPR023213 -
Pte4g00110 454 PANTHER F21J9.9 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00110 Pte-Chr4 2175064 2176463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00110 7 432 Monolignol Biosynthesis Gene Families AT5G48930 23.060 5.40e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00110 - - qsa:O6P43_014533 441.425