Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00071 ATGAATATTTTCATTACCAGCCTCGTGTTTCTGATTCCAATTTTCCTACTCTTCATTAGAAGTAGAACACCAAAAAGGACACCTCCAGGTTCGCTGGGAATACCTCTTATAGGCCAAAGTCTAGCTCTGCTCCGTGCAATGCGTGCAAATACTGCAGAAAAATGGCTTGAAGACAGAGTGAAAAAGTATGGACCTGTGTCAAAGCTAAGCCTCTTTGGCAAACCAACTGTTTTTATCTTTGGACAGGCTGCAAACAAATTGGTATTCACAGGCGGAGATAGCACAATTGCTAATCAGCAAACAGTGTCTATTAAAATGATTTTGGGAGATAGGAACTTGCTGGAACTGAGTGGTGATGATCATAAGCGCATCAGAGATGCCCTTGTTTCATTCTTGAAGCCTGAATCGTTGAAGCAGTACATCGGACAGATGGATGAAGAAATCAGGAATCATCTTCAGACACATTGGCAGGACGAGCAACAGGTGAAGGTGTTGCCCCTGATGAAGACGCTGACATTCAACATAATTTGCAATCTGCTATTTGGTCTAGAGCGAGGCCCACGGAGAGATAAGTTTTTAACTCACTTTCAGAAAATGGTAGAAGGGATGTGGTCAGTCCCTGTGAACCTGCCATTCACACGGTACAATAGAAGTCTCAGATCAAGTACTATAATTCAAAACATGGTAAAGGAACTTTTAGATGAGAAAAGGCTGCAACTTCAGGAAAAGGGTGCTTCTCCTAGACAAGATCTTATAACCTGCCTGCTCAGCATGCGTGGTGCAGATGGCAAGGAAGCCCTCACTGAGAGAGAAATGGTGCACAATATCATGGTTGTCATGGTTGCAGGGCACGACACTTCATCTTCTGTTATTACTTTAATCCTCAGGCTATTAGCTATTGAACCCAGTGTATACGCAAATGTTCTCAAAGAACAAGAAGAAATAGCAAAAAGCAAGCCAGCAGGAGGGTCACTGACATGGGAAGACCTTGCCGCGATGAAATACACTTGGAGAGTAGCATTGGAAACGCTGAGAATGTTCCCTCCGGTCTTCGGTGGCTTCAGAAAGGCTGTGACAGATATTGAATACGGTGGATACATCATACCAAAAGGGTGGCAAATTTTCTGGGTTGCGCCCATGACACATATGGACAGCAGCATATTCCAAGAACCATCCAAGTTTGATCCGAGTAGATTTAAAGACCCAGCATCAACTCCACCCTACTGTTTCGTACCATTTGGAGGGGGACCACGAATATGTCCAGGATATGAGTTTGCTAGGATTGAGATCCTTGTTGCAATGCACTATATTGTCACCCGATTCACATGGAAGCTATGTGCAGACACTGCATTTAGCAGGGACCCAATGCCAGTTCCCACCGGAGGATTACCAGTACAAATTTCGTCAAGGAAGGTGTCTTAG 1422 0.4423 MNIFITSLVFLIPIFLLFIRSRTPKRTPPGSLGIPLIGQSLALLRAMRANTAEKWLEDRVKKYGPVSKLSLFGKPTVFIFGQAANKLVFTGGDSTIANQQTVSIKMILGDRNLLELSGDDHKRIRDALVSFLKPESLKQYIGQMDEEIRNHLQTHWQDEQQVKVLPLMKTLTFNIICNLLFGLERGPRRDKFLTHFQKMVEGMWSVPVNLPFTRYNRSLRSSTIIQNMVKELLDEKRLQLQEKGASPRQDLITCLLSMRGADGKEALTEREMVHNIMVVMVAGHDTSSSVITLILRLLAIEPSVYANVLKEQEEIAKSKPAGGSLTWEDLAAMKYTWRVALETLRMFPPVFGGFRKAVTDIEYGGYIIPKGWQIFWVAPMTHMDSSIFQEPSKFDPSRFKDPASTPPYCFVPFGGGPRICPGYEFARIEILVAMHYIVTRFTWKLCADTAFSRDPMPVPTGGLPVQISSRKVS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00071 473 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 Pfam Cytochrome P450 28 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PANTHER CYTOCHROME P450 26 25 458 - -
Pte4g00071 473 SUPERFAMILY Cytochrome P450 19 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 Gene3D Cytochrome P450 20 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 CDD CYP90-like 59 468 - -
Pte4g00071 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Pte4g00071 473 FunFam Taxadiene 5-alpha hydroxylase 19 470 - -
Pte4g00071 473 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00071 473 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00071 Pte-Chr4 1203266 1206319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00071 28 374 Cytochrome P450 AT5G36110 34.758 3.57e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00071 - - cave:132176125 714.916