Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00051 ATGGCTGAAGTAGATCATATTGAGGAAATGATCAATTTGCTGGAAAGCCCTTCACCATACGACCCTGGCAAATTCAGAAGCCAACTGATGAAATTGAAGGATGTAGTGGTGGAGGGGAAGCTGAGGTTGCAGGAGAATCACGTTCATGAGCTTCAAAGTGTAGTCAATGCTCTTGAAGATATGCTGTATGATGATATGTCTTTGGGAAGTTCTAAGCTGAAGGACACAAAAAGCGGTAATATTCAGAAGAAGATAGATCCTGCAGTTATACAAGTTCATGCTGATCCCGAAGCTCAACCAACAAAGAAACATACTTCTTTTCTGGGAGTAAAATTATGGGGCAGAAGTGACCATGAGTCAACAAGATCTTCAGTGAAGTCACCTACGGCCACAAGCAGCACCAGCATGTTCACAGCTGACAAAAAAGCCTCACAGTCTTCTCAATCTCCAGCTCATGACCAGTTCTTGCGGCGGCCTCAGTCAAATGCTACACCTGGTCAGATTCAAAGTCCTGACAAAGCTCAACCTCAACAGCAATTTGGCACACAAGCCAAAAGGGTGGTAGATCCAGAAATCCACAAGATCGTAGATAAGCTTACTGAGCTTAAAGATAATGGTGAGGTTCAAATGTTGTTTGCCCTTATCAACTCTGAAGTCCCTACAAGTTCATCCACCCTGGCTTTTCATATCAGAGATCTTTCGACTGGGACAGAGCTCAGGAAAGTAGATAAGCAGAAAATCATGAACCTGGTGCTTGATTCCAGTGGGAAAGATTTCCTTAAAGTCATTCCAATTGTGGGAGATGCAGGAATTGGGAAGACGACGATTGCCAGGCTTGTTTACCATGATGAGACCGTGAGGAAACAATTTGACTTGAGGGCATGGATTAGTGTTTGTCAAGGCTTCGTTGATCTCAAGTTGGTTTCAAGGAACGGGACCAAGTCATTCATAACAGCGAAGCTGGAAGAACTGGATATGAATCAGACCAAGAATGTTCTGAAGCAGGATGTTGAAGGAAAGAGGTTTCTTCTCGTGCTGGATGATGTGTGGAGACAGCTGGAGCCAAAGAATTGGCATACGTTGAGAGACTTGTTAAAGGGTGCTGCTCCAGCTAGCAGAATCATGGCTACCACAAGTTTTCCTGAAGTTGTAGAAGCAATTCGCAGTATTGAGAAAGATGGCGCTGTTGAGAAACCTTATTCTCTAGAGCCGTTGACTGCGGATAATTCATTGGTCCTATGTAAGCAAGTGGCTTTGGATGAAGGACTAAAGGAAGGTGACATGAGAATCAAGAATGTTGCGGAAGAGATAGTAGAGAAGTGTGAAGGAGTACCTCTAGCAATAGAAGCGGCTGCAAGATTATTGTACTCACTAGATCCACAAAAACAACAACTTTCGTTGATACATCTCCAGGAGATAACAGAATCAATTAGAGAGAAGAAGATTATGGAAGTACTGAAGTTCTGCTACAATAATCTTCCTACTCCTCTAAAACAATGTTTTGCTTATTGTAGCTTATTCCCTAGAGGGTATACCATTGGTGTAGAGACTCTAATCAAGCTCTGGACTGCACATGGAATCTTCTTGCACTCAGATCAAGATGCAGAGAAGATTGGTCGTCAGTATTTCATGGAATTATATCGCAGGTCTTTTTTGCATGATGCTCAAGAAGATGAATTTGGCATTGTGAAAAGCTGTAAAATGCATGATCTTATGCATGAGCTAGCTACTCAAGTGGCACAGGACACCATGCTGTCACTGGACCAACAAGAGAAGAAAAAAACAGAAAACGAGGAGAGCACTCAACCAGTGAAGAATGGGGTTCGACATCTAGCCTTCAATTTCATTCCTGACTCGTCTTTGGAAATTCCATCCAACATAGATATTCCAGCATTATTGACATTTCTCATGCCTCGTCAAATGTCCCGCGTGGTCAGTGCTAATCCAGATCTATCTAAGACATTGGAAGGGATTGTTGCCCGCACTAAAAGATTACGTGTGCTGGATCTGCACAACTCAGGGTTAAGCATAGTGCCCAAGTCTATCACTTCATTGAAGGATCTAACGTTCCTTGACTTGTCCAGGAATGGCATGAAGAAGCTTGGAGTTTCTATATCTTCAACCAGCCTTCCTCACTTGCAGACACTGAAACTCTCTTTCTGTGAACAATTGGAAGAGCTCCCTAGCGATATTGGTTGTTTGCAGAGCCTTAAGCATCTTCAGATTGATGGATGTCGCAGTCTAACATCCATGCCAGCTGGGCTGATGAAGTTGACTTCTCTCATGACATTACCTCTATTTGTTGTCAGCAACAGAAGCTCAATTGGTCTTTCTAGCAATCCTGCACCTGTAGAAGCTTTGAAATCCTTGACTTCTTTGGGTGGTACACTTGAAATTGTAAATTTGGAACGACTGGTGGTTGGGCCGGCTAGAGGAATTCTGAACAGCACAGAAGGAATTCTGAACCGCACAGAACAACTCCAGCGCTTGTCACTAAGATGGGATCGTGATGACGATGATGCTAAAGATGCAAAGCTTGATAAAGAGCGGTTGGATGCTCTTGAGCCACATCAAAATCTCCAGGATTTATCTATTGTTGGCTATGGCCACCATTCCTTCTCAGCATGGCTACGCCCTTTCAAAAATCTCATCAGATTTAGCCTCTACAACTGCCCAAAACTTACAAATCTTCCATCATTGGATGAACTCTCATCGCTTAAGGTTCTGGAACTTCAAAGTATGAATGCTCTGACTTCTGTTACAGAAGATTCGTCCTCCTCTTCAGCAGTGCTGCTCCCATCGCTTGTGCAACTTACACTTTGGGATTGCGCTAATCTTGAGAATTGGACAAAATCAGCTGAGGCACCCTCTGTGGAGTTTTCTGTTCACCTGAAGAAATTAGACATAAGGTACTGTCCGTCTCTGATTTCTCTTCCTCAGTATACTCAAATCCAAGACGAACTGTATTTGGAATATGCCAGTCCAGAACTGCTGAAGATGACTATGGTCTCAACCCTGTCCAAATTGAAGTCTTTATACCTTAAAAATGTGGAGGGAATAAATTCTTTAGAACAACAGTGGGTCGGCAAGCTTGCATGTCTCGAGTATCTTCACATAAGGGACTGCCCTGAACTAACATCTCTCTCGAAAGGGATCCTGGCTTTAAGCTCACTTCGTTCTCTAATTGTTGAAAACTGCAGAGAGTTGGAACTCTCCGACAATGATGATGATGGAGATTATGATGGTAGGAAAAGCCTAAAACTTCGTGTTTTGACAATTGAAAGAATTCCAAAGCTGAAGTCTCTTCCACAATGGCTGAAGGATGTGCAAACTCTGCAAGTTGTCAAGCTAAGTAGCTGTTCCAATTTGGAAACTCTACCGGAGTGGATAGACAGTTTCTTCTCACTCAATAGACTAGCCATTTCAGGATGCCCGAAGTTGGCCTCCCTACCGCGTACTTTGAGTAAGGTCGATTCTCTATACACTTTGATTATTGACGATTGTCCCTTGTTATTACCAAGGTTGCAGAAGGAAACTGGGGAGGATTGGTCACAAATTGCTAATGTGCCCAATCTCATCCTTAAGCGCTCTATCTGA 3597 0.4315 MAEVDHIEEMINLLESPSPYDPGKFRSQLMKLKDVVVEGKLRLQENHVHELQSVVNALEDMLYDDMSLGSSKLKDTKSGNIQKKIDPAVIQVHADPEAQPTKKHTSFLGVKLWGRSDHESTRSSVKSPTATSSTSMFTADKKASQSSQSPAHDQFLRRPQSNATPGQIQSPDKAQPQQQFGTQAKRVVDPEIHKIVDKLTELKDNGEVQMLFALINSEVPTSSSTLAFHIRDLSTGTELRKVDKQKIMNLVLDSSGKDFLKVIPIVGDAGIGKTTIARLVYHDETVRKQFDLRAWISVCQGFVDLKLVSRNGTKSFITAKLEELDMNQTKNVLKQDVEGKRFLLVLDDVWRQLEPKNWHTLRDLLKGAAPASRIMATTSFPEVVEAIRSIEKDGAVEKPYSLEPLTADNSLVLCKQVALDEGLKEGDMRIKNVAEEIVEKCEGVPLAIEAAARLLYSLDPQKQQLSLIHLQEITESIREKKIMEVLKFCYNNLPTPLKQCFAYCSLFPRGYTIGVETLIKLWTAHGIFLHSDQDAEKIGRQYFMELYRRSFLHDAQEDEFGIVKSCKMHDLMHELATQVAQDTMLSLDQQEKKKTENEESTQPVKNGVRHLAFNFIPDSSLEIPSNIDIPALLTFLMPRQMSRVVSANPDLSKTLEGIVARTKRLRVLDLHNSGLSIVPKSITSLKDLTFLDLSRNGMKKLGVSISSTSLPHLQTLKLSFCEQLEELPSDIGCLQSLKHLQIDGCRSLTSMPAGLMKLTSLMTLPLFVVSNRSSIGLSSNPAPVEALKSLTSLGGTLEIVNLERLVVGPARGILNSTEGILNRTEQLQRLSLRWDRDDDDAKDAKLDKERLDALEPHQNLQDLSIVGYGHHSFSAWLRPFKNLIRFSLYNCPKLTNLPSLDELSSLKVLELQSMNALTSVTEDSSSSSAVLLPSLVQLTLWDCANLENWTKSAEAPSVEFSVHLKKLDIRYCPSLISLPQYTQIQDELYLEYASPELLKMTMVSTLSKLKSLYLKNVEGINSLEQQWVGKLACLEYLHIRDCPELTSLSKGILALSSLRSLIVENCRELELSDNDDDGDYDGRKSLKLRVLTIERIPKLKSLPQWLKDVQTLQVVKLSSCSNLETLPEWIDSFFSLNRLAISGCPKLASLPRTLSKVDSLYTLIIDDCPLLLPRLQKETGEDWSQIANVPNLILKRSI* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00051 1198 Gene3D Ribonuclease Inhibitor 631 989 IPR032675 -
Pte4g00051 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 504 IPR027417 -
Pte4g00051 1198 Gene3D - 496 578 IPR036388 -
Pte4g00051 1198 MobiDBLite consensus disorder prediction 123 184 - -
Pte4g00051 1198 Gene3D - 222 392 IPR027417 -
Pte4g00051 1198 Gene3D - 405 494 IPR042197 -
Pte4g00051 1198 SUPERFAMILY RNI-like 1000 1171 - -
Pte4g00051 1198 Pfam NB-ARC domain 246 492 IPR002182 GO:0043531
Pte4g00051 1198 SUPERFAMILY L domain-like 553 1067 - -
Pte4g00051 1198 Gene3D Ribonuclease Inhibitor 990 1076 IPR032675 -
Pte4g00051 1198 Gene3D Ribonuclease Inhibitor 1083 1182 IPR032675 -
Pte4g00051 1198 FunFam Probable disease resistance protein At1g63360 490 578 - -
Pte4g00051 1198 PANTHER DISEASE RESISTANCE PROTEIN RP 113 944 IPR044974 GO:0006952
Pte4g00051 1198 PRINTS Disease resistance protein signature 441 455 - -
Pte4g00051 1198 PRINTS Disease resistance protein signature 262 277 - -
Pte4g00051 1198 PRINTS Disease resistance protein signature 901 917 - -
Pte4g00051 1198 PRINTS Disease resistance protein signature 336 350 - -
Pte4g00051 1198 MobiDBLite consensus disorder prediction 117 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00051 Pte-Chr4 929018 933285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00051 260 920 WRKY Transcription Factor Family AT5G45050 22.141 2.73e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00051 - - qsa:O6P43_013111 617.846