Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00042 ATGTTATATATAAGCACCATTTCCAATTTTGAGCTCTTTTTGAGTTTAATAATTTCTTTGACCCTCCTTCCCATCCCTCTCTCAGAACACTTCCTTGCAGGAAAGAGAGTCATGAATATTTTCATTACCAGCCTCGTGTTTCTGATTCCAATTTTCCTACTCTTCATTAGAAGTAGAACACCAAAAAGGACACCTCCAGGTTCGCTGGGAATACCTCTTATAGGCCAAAGTCTAGCTCTGCTCCGTGCAATGCGTGCAAATACTGCAGAAAAATGGCTTGAAGACAGAGTGAAAAAGTATGGACCTGTGTCAAAGCTAAGCCTCTTTGGCAAACCAACTGTTTTTATCTTTGGACAGGCTGCAAACAAATTGGTATTCACAGGCGGAGATAGCAAAATTGCTAATCAGCAAACAGTGTCTATTAAAATGATTTTAGGAGATAGGAACTTGCTGGAACTGAGTGGTGATGATCATAAGCGCATCAGAGATGCCCTTGTTTCATTCTTGAAGCCTGAATCGTTGAAGCAGTACATCGGACAGATGGATGAAGAAATCAGGAATCATCTTCAGACACATTGGCAGGACGAGCAACAGGTGAAGGTGTTGCCCCTGATGAAGACGCTGACATTCAACATAATTTGCAATCTGCTATTTGGTCTAGAGCGAGGCCCACGGAGAGATAAGTTTTTAACTCACTTTCAGAAAATGGTAGAAGGGATGTGGTCAGTCCCTGTGAACCTGCCATTCACACGGTACAATAGAAGTCTCAGATCAAGTACTATTATTCAAAACATGGTAAAGGAACTTTTAGATGAGAAAAGGCTGCAACTTCAGGAAAAGGGTGCTTCTCCTAGACAAGATCTTATAACCTGCCTGCTCAGCATGCGTGGTGCAGATGGCAAGGAAGCCCTCACTGAGAGAGAAATGGTGCACAATATCATGGTTGTCATGGTTGCAGGGCACGACACTTCATCTTCTGTTATTACTTTAATCCTCAGGCTATTAGCTATTGAACCCAGTGTATACGCAAATGTTCTCAAAGAACAAGAAGAAATAGCAAAAAGCAAGCCAGCAGGAGGGTCACTGACATGGGAAGACCTTGCCGCGATGAAATACACTTGGAGAGTAGCATTGGAAACGCTGAGAATGTTCCCTCCGGTCTTCGGTGGCTTCAGAAAGGCTGTGACAGATATTGAATACGGTGGATACATCATACCAAAAGGGTGGCAAATTTTCTGGGTTGCGCCCATGACACATATGGACAGCAGCATATTCCCAGAACCATCCAAGTTTGATCCGAGTAGATTTAAAGACCCAGCATCAACTCCACCCTACTGTTTCGTACCATTTGGAGGGGGACCACGAATATGTCCAGGATATGAGTTTGCTAGGATTGAGATCCTTGTTGCAATGCACTATATTGTCACCCGATTCACATGGAAGCTATGTGCAGACACTGCATTTAGCAGGGACCCAATGCCAGTTCCCACCGGAGGATTACCAGTACAAATTTCGTCAAGGAAGGTGTCTTAG 1533 0.4371 MLYISTISNFELFLSLIISLTLLPIPLSEHFLAGKRVMNIFITSLVFLIPIFLLFIRSRTPKRTPPGSLGIPLIGQSLALLRAMRANTAEKWLEDRVKKYGPVSKLSLFGKPTVFIFGQAANKLVFTGGDSKIANQQTVSIKMILGDRNLLELSGDDHKRIRDALVSFLKPESLKQYIGQMDEEIRNHLQTHWQDEQQVKVLPLMKTLTFNIICNLLFGLERGPRRDKFLTHFQKMVEGMWSVPVNLPFTRYNRSLRSSTIIQNMVKELLDEKRLQLQEKGASPRQDLITCLLSMRGADGKEALTEREMVHNIMVVMVAGHDTSSSVITLILRLLAIEPSVYANVLKEQEEIAKSKPAGGSLTWEDLAAMKYTWRVALETLRMFPPVFGGFRKAVTDIEYGGYIIPKGWQIFWVAPMTHMDSSIFPEPSKFDPSRFKDPASTPPYCFVPFGGGPRICPGYEFARIEILVAMHYIVTRFTWKLCADTAFSRDPMPVPTGGLPVQISSRKVS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00042 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Pte4g00042 510 PANTHER CYTOCHROME P450 26 62 495 - -
Pte4g00042 510 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 Gene3D Cytochrome P450 57 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 SUPERFAMILY Cytochrome P450 56 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 CDD CYP90-like 96 505 - -
Pte4g00042 510 FunFam Taxadiene 5-alpha hydroxylase 56 507 - -
Pte4g00042 510 Pfam Cytochrome P450 65 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte4g00042 510 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00042 Pte-Chr4 754183 756367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00042 65 411 Cytochrome P450 AT5G36110 34.758 1.66e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00042 - - cave:132176125 715.687