Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00040 ATGGCCATCTCGAGGGTATTGGAGTTGATCATACTGGAATATCCTTCTGCAGTTCTGTTGTCTCAAGTTCTTCCACAACCAAAGTACATGGTGGATTTGGACATATCAGTTCCTACTGCTTTTGATCCATTTGGTGACGCGAAAGACTCGAATGCCCCCGGAGCCAAGGACTATGTTCATATTCGAATCCAGCAGAGGAATGGTAAAAAGTGCCTGACCACTGTGCAAGGGCTGAATAAGGGTTTCAGCTACGAGAGAATTCTCAAAGATTTGAAGAAAGAGTTCTGCTGCAATGGGAATGTTGTGCAGGATAAGGAGCTAGGAAAGGTCATCCAGTTGCAGGGGGATCAACGCAAGAACGTCTCTCAGTTCCTCGTTCAGGCTGGCCTTGCGCCAAAGGATCAAATCAAAATTCATGGTTTTTGA 426 0.4577 MAISRVLELIILEYPSAVLLSQVLPQPKYMVDLDISVPTAFDPFGDAKDSNAPGAKDYVHIRIQQRNGKKCLTTVQGLNKGFSYERILKDLKKEFCCNGNVVQDKELGKVIQLQGDQRKNVSQFLVQAGLAPKDQIKIHGF* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00040 141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 35 141 - -
Pte4g00040 141 NCBIfam translation initiation factor SUI1 35 141 IPR005874 GO:0003743
Pte4g00040 141 ProSiteProfiles Translation initiation factor SUI1 family profile. 59 129 IPR001950 GO:0003743|GO:0006413
Pte4g00040 141 Gene3D - 26 141 - -
Pte4g00040 141 Pfam Translation initiation factor SUI1 56 129 IPR001950 GO:0003743|GO:0006413
Pte4g00040 141 FunFam Eukaryotic translation initiation factor SUI1 31 141 - -
Pte4g00040 141 CDD eIF1_SUI1 57 140 IPR005874 GO:0003743
Pte4g00040 141 SUPERFAMILY eIF1-like 28 141 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00040 Pte-Chr4 734123 734943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00040 30 142 Eukaryotic Initiation Factors Gene Family AT5G54940 81.416 1.17e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00040 K03113 - csv:101214921 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00040 4 734123 734943 Pte4g00040 4 734123 734943 RCT