Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00039 ATGGCTGAAGTAGATCATATTGAGGAAATGATAAATTTGCTGGAAAGCCCTCCACCATACGACCCTGGCAAATTCAGAAGCCAACTCATGAAATTGAAGGATGTAGTGGTGGAGGGGAAGCTGAGGTTGCAGGAGAATCACGTTCATGAGCTTCGAAGTGTAGTCAATGCTCTTGAAGATATGCTGTATGATGATATGTCTTTGGGAAGTTCTAAGCTGAAGGACACAAAAAGCGGTAATATCCAGAAGAAGATAGATCCTGCAGTCATACAAGTTCATACTGATCCCGAAGCTCAACCAACAAAGAAACATACTTCTTTTCTGGGAGTAAAATTATGGGGCAGAAGTGACCCTGAGTCAACAAGATCTTCAGTGAAGTCACCTACGGCCACAAGCAGCACCAGCATGTTCACAGCTGACAAAAAAGTCTCACAGTCTTCTCAATCTCCAGCTCATGACCAGTTCTTGCGGCGGCCTCAGTCAAATGCTACACCTGGTCAGATTCAAAGTCCTGACAAAGCTCAACCTCAACAGCAATTTGGCACACAAGCCAAAAGGGTGGTAGATCCAGAAATCCGCAAGATCGTAGATAAGCTTACCGAGCTTAAAGATAATGGTGAGGTTCAAATGTTGTTTGCCCTTATCAACTCTGAAGTCCCTACAAGTTCATCCACCCTGGCTTTTCATATCAGAGATCTTTCGACTGGGACAGAGCTCAGGAAAGTAGATAAGCAGAAAATCGTGAACCTGCTTGATTCCAGTGGGAAAGATTTCCTTAAAGTCATTCCAATTGTGGGAGATGCAGGAATTGGGAAGACGACGATTGCCAGGCTTGTTTACCATGATGAGACCGTGAGGAAACAATTTGACTTGAGGGCATGGATTAGTGTTTGTCAAGGCTTCGTTGATCTCAAGTTGGTTTCAAGGAACGGGACCAAGTCATTCATAACAGCGAAGCTGGAAGAACTGGATATGAATCAGACCAAGAATGTTCTGAAGCAGGATGTTGAAGGAAAGAGGTTTCTTCTCGTGCTGGATGATGTGTGGAGACAGCTGGAGCCAAAGAATTGGCATACGTTGAGAGACTTGTTAAAGGGTGCTGCTCCAGCTAGCAGAATCATGGCTACCACAAGTTTTCCTGAAGTTGTAGAAGCAATTCGCAGTATTGAGAAAGATGGCGCTGTTGAGAAACCTTATTCTCTAGAGCCGTTGACTGCGGATAATTCAATGGTCCTATGTAAGCAAGTGGCTTTGGATGAAGGACTAAAGGAAGGTGACACGAGAATCAAGAATGTTGCGGAAGAGATAGTAGAGAAGTGTGAAGGAGTACCTCTAGCAATAGAAGCGGCTGCAAGATTATTGTACTCACTAGATCCACAAAAACAACAACTTTCGTTGATACATCTCCAGGAGATAACAGAATCAATTAGAGAGAAGAAGATTATGGAAGTACTGAAGTTCTGCTACAATAATCTTCCTACTCCTCTAAAACAATGTTTTGCTTATTGTAGCTTATTCCCTAGAGGGTATACCATCGGTGTAGAGACTCTAATCAAGCTCTGGACTGCACATGGAATCATCTTGCACTCAGATCATCAAGATGCAGAGAAGATTGGTCGTCAGTATTTCATGGAATTATATCGCAGGTCTTTTTTGCATGATGCTCAAGAAGATGAATTTGGCATTGTGAAAAGCTGTAAAATGCATGATCTTATGCATGAGCTAGCTACTCAAGTGGCACAGGACACCATGCTGTTACTGGACCAACAAGAGAAGAAAAAAACAGAAAACGAGGAGAGCACTCAACCAGTGAAGAATGGGGTTCGACATCTAGCCTTCAATTTCATTCCTGACTCGTCTTTGGAAATTCCATCCAACATAGATATTCCAGCATTATTGACATTTCTCATGCCTCGTCAAATGTCCCGCGTGGTCAGTGCTAATCCAGATCTATCTAAGACATTGGAAGGGATTGTTGCCCGCACTAAAAGATTACGTGTGCTGGATCTGCACAACTCAGGGTTAAGCATAGTGCCCAAGTCTATCACTTCATTGAAGGATCTAACGTTCCTTGACTTGTCCAGGAATGGCATGAAGAAGCTTGGAGTTTCTATATCTTCAACCAGCCTTCCTCACTTGCAGACACTGAAACTCTCTTTATGTGAACAATTGGAAGAGCTCCCTAGCGATATTGGTTGTTTGCAGAGTCTTAAGCATCTTCAGATTGATGGATGTCGCAGTCTAACATCCATGCCAGCTGGGCTGATGAAGTTGACTTCTCTCATGACATTACCTCTATTTGTTGTCAGCAACAGAAGCTCAATTGGTCTTTCTAGCAATCCTGCACCTGTAGAAGCTTTGAAATCCTTGACTTCTTTGGGTGGTACACTTGAAATTGTAAATTTGGAACGACTGGTGGTTGGGCCGGCTAGAGGAATTCTGAACAGCACAGAAGGAATTCTGAACCGCACAGAACAACTCCAGCGCTTGTCACTAAGATGGGATCGTGATGACGATGATGCTAAAGATGCAAAGCTTGATAAAGAGCGGTTGGATGCTCTTGAGCCACATCAAAATCTCCAGGATTTATCTATTGTTGGCTATGGCCACGATTCCTTCTCAGCATGGCTACGCCCTTTCAAAAATCTCATCAGATTTAGCCTCTACAACTGCCCAAAACTTACAAATCTTCCATCATTGGATGAACTCTCATCGCTTAAGGTTCTGGAACTTCAAAGTATGAATGCTCTGACTTCTGTTACAGAAGATTCGTCCTCCTCTTCAGCAGTGCTGCTCCCATCGCTTGTGCAACTTACACTTTGGGATTGCGCTAATCTTGAGAATTGGACAAAATCAGCTGAGGCACCCTCTGTGGAGTTTTCTGTTCACCTGAAGAAATTAGACATAAGGTACTGTCCGTCTCTGATTTCTCTTCCTCAGTATACTCAAATCCAAGACGAACTGTATTTGGAATATGCCAGTCCAGAACTGCTGAAGATGACTATGGTCTCAACCTTGTCCAAATTGAAGTCTTTATACCTTAAAAATGTGGAGGGAATAAATTCTTTAGAACAACAGTGGGTCGGCAAGCTTGCATGTCTCGAGTATCTTCACATAAGGGACTGCCCTGAACTAACATCTCTCTCGAAAGGGATCCTGGCTTTAAGCTCACTTCGTTCTCTAATTGTTGAAAACTGCAGAGAGTTGGAACTCTCCGACAATGATGATGATGGAGATTATGATGGTAGGAAAAGCCGAAAACTTCGTGTTTTGACAATTGAAAGAATTCCAAAGCTGAAGTCTCTTCCACAATGGCTGAAGGATGTGCAAACTCTGCAAGTTGTCAAGCTAAGTAGCTGTTCCAATTTGGAAACTCTACCAGAGTGGATAGACAGTTTCTGCTCACTCAATAGACTAGCCATTTCAGGATGCCCGAAGTTGGCCTCCCTACCGCGTACTTTGAGTAAGGTCGACTCTCTATACACTTTGATTATTGACGATTGTCCCTTGTTATTACCAAGGTTGCAGAAGGAAACTGGGGAGGATTGGTCACAAATTGCTAATGTGCCCAATCTCATCCTTAAGCGCTCTATCTGA 3597 0.4326 MAEVDHIEEMINLLESPPPYDPGKFRSQLMKLKDVVVEGKLRLQENHVHELRSVVNALEDMLYDDMSLGSSKLKDTKSGNIQKKIDPAVIQVHTDPEAQPTKKHTSFLGVKLWGRSDPESTRSSVKSPTATSSTSMFTADKKVSQSSQSPAHDQFLRRPQSNATPGQIQSPDKAQPQQQFGTQAKRVVDPEIRKIVDKLTELKDNGEVQMLFALINSEVPTSSSTLAFHIRDLSTGTELRKVDKQKIVNLLDSSGKDFLKVIPIVGDAGIGKTTIARLVYHDETVRKQFDLRAWISVCQGFVDLKLVSRNGTKSFITAKLEELDMNQTKNVLKQDVEGKRFLLVLDDVWRQLEPKNWHTLRDLLKGAAPASRIMATTSFPEVVEAIRSIEKDGAVEKPYSLEPLTADNSMVLCKQVALDEGLKEGDTRIKNVAEEIVEKCEGVPLAIEAAARLLYSLDPQKQQLSLIHLQEITESIREKKIMEVLKFCYNNLPTPLKQCFAYCSLFPRGYTIGVETLIKLWTAHGIILHSDHQDAEKIGRQYFMELYRRSFLHDAQEDEFGIVKSCKMHDLMHELATQVAQDTMLLLDQQEKKKTENEESTQPVKNGVRHLAFNFIPDSSLEIPSNIDIPALLTFLMPRQMSRVVSANPDLSKTLEGIVARTKRLRVLDLHNSGLSIVPKSITSLKDLTFLDLSRNGMKKLGVSISSTSLPHLQTLKLSLCEQLEELPSDIGCLQSLKHLQIDGCRSLTSMPAGLMKLTSLMTLPLFVVSNRSSIGLSSNPAPVEALKSLTSLGGTLEIVNLERLVVGPARGILNSTEGILNRTEQLQRLSLRWDRDDDDAKDAKLDKERLDALEPHQNLQDLSIVGYGHDSFSAWLRPFKNLIRFSLYNCPKLTNLPSLDELSSLKVLELQSMNALTSVTEDSSSSSAVLLPSLVQLTLWDCANLENWTKSAEAPSVEFSVHLKKLDIRYCPSLISLPQYTQIQDELYLEYASPELLKMTMVSTLSKLKSLYLKNVEGINSLEQQWVGKLACLEYLHIRDCPELTSLSKGILALSSLRSLIVENCRELELSDNDDDGDYDGRKSRKLRVLTIERIPKLKSLPQWLKDVQTLQVVKLSSCSNLETLPEWIDSFCSLNRLAISGCPKLASLPRTLSKVDSLYTLIIDDCPLLLPRLQKETGEDWSQIANVPNLILKRSI* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00039 1198 Gene3D Ribonuclease Inhibitor 988 1076 IPR032675 -
Pte4g00039 1198 Gene3D Ribonuclease Inhibitor 1081 1182 IPR032675 -
Pte4g00039 1198 Gene3D - 404 493 IPR042197 -
Pte4g00039 1198 Pfam NB-ARC domain 243 491 IPR002182 GO:0043531
Pte4g00039 1198 Gene3D - 222 391 IPR027417 -
Pte4g00039 1198 Gene3D - 495 578 IPR036388 -
Pte4g00039 1198 FunFam Probable disease resistance protein At1g63360 489 578 - -
Pte4g00039 1198 PRINTS Disease resistance protein signature 261 276 - -
Pte4g00039 1198 PRINTS Disease resistance protein signature 335 349 - -
Pte4g00039 1198 PRINTS Disease resistance protein signature 901 917 - -
Pte4g00039 1198 PRINTS Disease resistance protein signature 440 454 - -
Pte4g00039 1198 PANTHER DISEASE RESISTANCE PROTEIN RP 104 944 IPR044974 GO:0006952
Pte4g00039 1198 MobiDBLite consensus disorder prediction 117 184 - -
Pte4g00039 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 503 IPR027417 -
Pte4g00039 1198 MobiDBLite consensus disorder prediction 93 186 - -
Pte4g00039 1198 SUPERFAMILY L domain-like 553 1066 - -
Pte4g00039 1198 Gene3D Ribonuclease Inhibitor 631 987 IPR032675 -
Pte4g00039 1198 SUPERFAMILY RNI-like 1001 1171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00039 Pte-Chr4 708741 712997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00039 259 920 WRKY Transcription Factor Family AT5G45050 21.816 2.48e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00039 - - qsa:O6P43_013111 622.854