Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00032 ATGGCTTCAGATGGGAAACGAGTGATCATAGATGAGATGGACTTCTTTTCTGTCAAAAATCAATACAGCAGAGACTTTAAGAAAGAGAGAACTGAACATCATAAGCAGATGCTCCACACAAATTGGCTCCATACTGGTTTGGATCTCACGATGAACACTAACAGCACCAAATCAACAGTACTAGTGGATGATGGAACTTCGACCCACAACCTGGAAGATAAGAGGAATGCATCGGATCGGGTTAAGAAGAAGAAAGGAAGGAATGAAATTCAAGGACAACTCTTGGAAATGAGTTCAGTTTCTAGTCACGAAAGACATGAATTACATCCACAAATATCTTCTCAAGGAAATCAACATGAACGCATTGACGAAGGAAATGATCAGTTAGATCGAGATATGAGTGATTATGGTAGAGACGGCACGAGGTCAAGAGCAGATGAGAAACCTAACCAAGAGGTTCCTCAATCGCTTACCAACAAGGTAGGAGCAAGGTTGAATACATTCAGGGACGTTGATCAAGAATCTGCAGAGAACATGATTAAGAAAGCTCGTGTATCAGTAAGAGCACGATCCGAGTCCACAATGATTTCAGACGGATGTCAATGGAGAAAATATGGGCAGAAGATGGCAAAACGCAATCCATGCCCTAAAGCTTATTACCGATGCACTATGGGGACTGGTTGTTCAGTCAGGAAGCAAGTGCAAAGGTGTGCAGAAGATCAAACCATTTTGGTTACAACATATGATGGTCAACACAATCATCCATTACCTCCAAATGCCTTAGCAATGGTATCAACAACATCAGCTGCAGCATCGATGCTCCTTTCAAGCTCAATACTAAGTGAAGATGGACCTATGAACTCAAACTTATTCTCAAGAGCTACACTCCCATTTGCACCAAATCTTGCTACCCTCTCAGCAACAGCACCATTTCCGACCATAACACTGGATCTTTCACGAAGTAATTCTTCATCATCAGATTTAATACCAAGTGAAACATCACAAGTCTTCTCTCAAAATTTAACTCAGAATTTGATCTCATTGCCAAGTATCGTTACTCAGGCTCCTCAAAATAACCACTTTGTTCATGGTTCTGAAACAACGGAGCCTCCTTCACTAGCGCCCATTATGATGCAATCACGTTCATTTTCTGACACTGTGAGTGCAGCAGCGGCAGCCATTACGGCAGACCCCAACTTAACATCAGCTTTGGTGGCGGCAATTGCATCTATCATGGGAAACAGTGATCAACCAAGAAACAATGGGAATAATGAATGA 1278 0.4202 MASDGKRVIIDEMDFFSVKNQYSRDFKKERTEHHKQMLHTNWLHTGLDLTMNTNSTKSTVLVDDGTSTHNLEDKRNASDRVKKKKGRNEIQGQLLEMSSVSSHERHELHPQISSQGNQHERIDEGNDQLDRDMSDYGRDGTRSRADEKPNQEVPQSLTNKVGARLNTFRDVDQESAENMIKKARVSVRARSESTMISDGCQWRKYGQKMAKRNPCPKAYYRCTMGTGCSVRKQVQRCAEDQTILVTTYDGQHNHPLPPNALAMVSTTSAAASMLLSSSILSEDGPMNSNLFSRATLPFAPNLATLSATAPFPTITLDLSRSNSSSSDLIPSETSQVFSQNLTQNLISLPSIVTQAPQNNHFVHGSETTEPPSLAPIMMQSRSFSDTVSAAAAAITADPNLTSALVAAIASIMGNSDQPRNNGNNE* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00032 425 FunFam probable WRKY transcription factor 31 181 258 - -
Pte4g00032 425 Pfam WRKY DNA -binding domain 198 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00032 425 SMART WRKY_cls 196 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00032 425 ProSiteProfiles WRKY domain profile. 191 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte4g00032 425 MobiDBLite consensus disorder prediction 67 90 - -
Pte4g00032 425 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00032 425 Coils Coil 423 425 - -
Pte4g00032 425 Gene3D WRKY domain 181 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte4g00032 425 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 82 423 IPR044810 GO:0003700
Pte4g00032 425 MobiDBLite consensus disorder prediction 60 160 - -
Pte4g00032 425 MobiDBLite consensus disorder prediction 120 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00032 Pte-Chr4 589049 592498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00032 1 425 WRKY Transcription Factor Family AT1G62300 38.509 1.46e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte4g00032 WRKY 5.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00032 - - qsa:O6P43_021195 297.36