Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00028 ATGGCGAATCTTCCTCAGTCCCTATCAATGAGCGCACATTTTGGGGGTCCTGGTGGACTTGGTCAAGGTCTTGCCGGAGTACATGGAAACAAGGACCGGAAGATGGCTTCAGCCGAGCAATTGGTACTCGATCTCAGCAATCCTGATCTTCGAGAAAATGCTCTTCTTGAGCTATCCAAGAAGAGAGAATTATTTCAAGATTTGGCTCCGCTCTTATGGAATTCTTTTGGTACGATTGCTGCACTGTTACAGGAAATCGTTTCAATATATCCCGTTCTGTCCCCACCAAATCTGACTCCAGCACAATCAAATCGAGTATGCAATGCCCTAGCTCTTCTTCAGTGTGTAGCATCACACCCAGATACAAGAATGTTATTCCTCAATGCTCATATACCTTTGTATCTTTACCCTTTTCTTAATACAACAAGCAAGTCAAGGCCCTTTGAATACTTGAGGCTGACCAGCTTAGGTGTCATCGGTGCTTTGGTGAAGGTTGATGATACTGAAGTCATCAGTTTCCTGCTTTCAACGGAGATAATTCCTCTGTGCCTTCGTACAATGGAAATGGGGAGCGAATTGTCAAAAACGATCAGTAGTGTGGCACTTGAGCCATCAAACACAAATGCAGCCAAGGTGTACTCAATATAA 648 0.4414 MANLPQSLSMSAHFGGPGGLGQGLAGVHGNKDRKMASAEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTISSVALEPSNTNAAKVYSI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00028 215 PANTHER UNCHARACTERIZED 32 199 IPR007216 GO:0006402|GO:0030014
Pte4g00028 215 Pfam Cell differentiation family, Rcd1-like 41 201 - -
Pte4g00028 215 Gene3D - 29 204 IPR011989 -
Pte4g00028 215 SUPERFAMILY ARM repeat 43 192 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00028 Pte-Chr4 533983 537842 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Pte4g00028 Rcd1 1.2e-79 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00028 K12606 - zju:107421967 348.206