Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00025 ATGGAACCAGGTTTTGTCAATGGTAATGGAACAGAACCAGGTCAGATAATTACAACAGCAGTTGGTGGTCGAGATGGACAGCCAAAACAGACAATCTCTTACATGGCAGAACGTATTGTTGGAACTGGTTCGTTTGGAGTTGTTTTTCAGGCTAAGTGTTTGGAAACTGGTGAAGCAGTTGGCATAAAAAAAGTGTTGCAGGACAAGAGATTTAAAAACAGGGAACTCCAGATTATGCGGATGCTTGATCATCCTAACATTGTTCAACTGAAACATTGTTTCTATTCAACTACTGAGAAAGATGAGGTGTACCTTAACTTGGTCATGGAGTATATATCCGAAACTGTTTATAGAGTTTCCAAACATCATGCCAGGATGCACCAGCATATGCCTATGATTTATGTGAAGCTGTATACATACCAGATATGCCGTGCTCTTAATTACTTGCATCATGTTGTTGGTGTGTGTCATAGAGACATTAAGCCGCAGAATTTACTGGTTAATCCCAACACTCACGAGCTAAAGATATGTGATTTTGGGAGTGCAAAGATGCTGGTTCCAGGTGAACCCAACATAGCATATATATGCTCACGCTATTACAGGGCTCCGGAGCTTATATTTGGGGCTACAGAATATACAAATGCTATTGATATGTGGTCAGTTGGTTGTGTTATGGCTGAGCTCCTTCTAGGACAGCCTTTGTTTCCTGGGGAGAGTGGGGTTGATCAACTTGTGGAAATTATTAAGATTTTGGGGACTCCGACCAGAGAAGAGATTAAGTGTATGAATCCGAATTACACCGAATTTAAGTTCCCTCAAATTAAGGCTCACCCATGGCACAAGGTTTTCCAAAAGAGAATGCCTCCTGAAGCAGTGGATCTTGTGTCAAGGCTTCTGCAATATTCGCCAAATTTACGCTGCACTGCTTTGGAGGCATGTGCTCATCCATTCTTCGATGATCTGAGGGATCCAACTGCAAGCTTGCCAAATGGAGGAGGGCTTCCTCCTCTATTCAATTTCACCGCTCAAGAACTTGCTGGAGCACCGGCTGAGTTACGAGATCAGCTCATTCCTGCTCATGCCAAGAACTAA 1092 0.4286 MEPGFVNGNGTEPGQIITTAVGGRDGQPKQTISYMAERIVGTGSFGVVFQAKCLETGEAVGIKKVLQDKRFKNRELQIMRMLDHPNIVQLKHCFYSTTEKDEVYLNLVMEYISETVYRVSKHHARMHQHMPMIYVKLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPNTHELKICDFGSAKMLVPGEPNIAYICSRYYRAPELIFGATEYTNAIDMWSVGCVMAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFQKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPTASLPNGGGLPPLFNFTAQELAGAPAELRDQLIPAHAKN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00025 363 ProSiteProfiles Protein kinase domain profile. 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00025 363 CDD STKc_GSK3 29 321 IPR039192 -
Pte4g00025 363 Gene3D Transferase(Phosphotransferase) domain 1 114 362 - -
Pte4g00025 363 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Pte4g00025 363 SUPERFAMILY Protein kinase-like (PK-like) 33 341 IPR011009 -
Pte4g00025 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Pte4g00025 363 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 362 - -
Pte4g00025 363 SMART serkin_6 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte4g00025 363 FunFam Shaggy-related protein kinase kappa 114 362 - -
Pte4g00025 363 FunFam Glycogen synthase kinase-3 beta 18 113 - -
Pte4g00025 363 Pfam Protein kinase domain 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00025 Pte-Chr4 495858 499106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte4g00025 38 354 MAP Kinase Gene Family AT3G59790 35.241 1.81e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte4g00025 Pkinase 3e-66 CL0016