Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00024 ATGGCGAACGAGGAGGAGAAGGTTCTAGAGGAGCAGCTAGAGCTTCAATTGCATGAGCAGAAAGATTCACTAGCAGCTATCAGAGAAGCTTTGGCTTCTGACCCTGGAAATGCGGAACTTCTTGCGGTTCATGAGGAACTTGTCCAAGCAACTAAAGATGCTGAAGATGGGCTTGTTCACTTAAAGCGTGCAAGATTATTGCGGGAAGCAGACTCTATCTTTCCTGGTTCTAATGATCTATTTGAGGATGTGAGAGCAGAACCACTTGATCTTATAGATGTTGAACCAGAACCATTAGAGGAACAATCTTACTCTGTTGGATCAAAATGCAGATTCCGTTTTACTGATGGCCGTTGGTACAATGGGAAAGTTGTGCAGTTGGACGGTTCAGAAGCAAAGATTTGTTTCCTCACTCCTACATCTGAAAAGATGTTGATGTGCAAGTTCTTCTTACAGCAAAGATGTAGATTTGGTGTGAACTGTCGCCAATCACATGGAATTGATGTGCCATTGTCATCTCTGAAGAAACATGTTCCAACAATTTGGAAGCAATCTTTGGTTGGGTCTAGTATATGGGCAGTATCAGATGCTGATACTGGCATTTGGAAGGAAGCTGAACTTGCAACATGGGATGAAGAAGCTAGAGAAGGAAAAGTTGTTTTCTGTGATGACGGAAGCTTTGCAAGCCTTAAAGAAGAAGGGATAGCTTTATCGGAATATGCAGAACAGAGTGATGATGATAGTGAGTGCAGTTTCGAGGAATCTGATTCTAGTGATTATGACGAGGGTGCACAAGGTGTTGGATTTTTAGTAACAACCAACCAGCAGAAGGGAATTCAGACCGACACTGCCATATTTGCCAAGTGGGAGAATCACACCCGGGGAATAGCTTCCAAAATGATGGCCAATATGGGTTATTGTGAAGGGATGGGTCTTGGAATATCGGGCCAAGGGATGCTGAATCCAATCTCTGTAAAAGTTCTTCCACCAAAACAATCTCTAGATCTTGCTTTCAAGTCTCATGGAGGTGAAGAGGAGATCAAAGAGCATCAAGGAAAGAAGCGTAGTAGAGGTGGCAAGAGAAAACGGCAGAAGAAGTTTGCAGCCGAGTCTCGTGCAGCCAAAGAAGAAGAATCTGGTTCTGATATGTTTACCATCATCAATAACCAGCTTGCGATGCATAATGAAATTGTGAATGGTACGTCAGCAAAGAAGCAACAATCTAAAGGTACAGAAGAGGGCAAAAAGGTAGACAGGCGGACTCTGGTAGCTTACGAGGAGGAGATAAAGGAACTGAAGATGCGGGTTGAGAGGCTTGAAGAGATGGTAAACAGAAACAAGAAAGAGAAGGCTGTTTATGAAGCTGCTATGAGAAAGTTAATTGAGACCCGCAAAGCTTTAGCAGAAGCTGAGGCAATGCATGCCTCTGCATCAAATACAGTTGTTAGCAAAGAAAAAGAGAAGAAATGGCTTAAGTTTTAG 1482 0.4305 MANEEEKVLEEQLELQLHEQKDSLAAIREALASDPGNAELLAVHEELVQATKDAEDGLVHLKRARLLREADSIFPGSNDLFEDVRAEPLDLIDVEPEPLEEQSYSVGSKCRFRFTDGRWYNGKVVQLDGSEAKICFLTPTSEKMLMCKFFLQQRCRFGVNCRQSHGIDVPLSSLKKHVPTIWKQSLVGSSIWAVSDADTGIWKEAELATWDEEAREGKVVFCDDGSFASLKEEGIALSEYAEQSDDDSECSFEESDSSDYDEGAQGVGFLVTTNQQKGIQTDTAIFAKWENHTRGIASKMMANMGYCEGMGLGISGQGMLNPISVKVLPPKQSLDLAFKSHGGEEEIKEHQGKKRSRGGKRKRQKKFAAESRAAKEEESGSDMFTIINNQLAMHNEIVNGTSAKKQQSKGTEEGKKVDRRTLVAYEEEIKELKMRVERLEEMVNRNKKEKAVYEAAMRKLIETRKALAEAEAMHASASNTVVSKEKEKKWLKF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00024 493 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Pte4g00024 493 Coils Coil 415 487 - -
Pte4g00024 493 SMART G-patch_5 291 337 IPR000467 GO:0003676
Pte4g00024 493 Pfam G-patch domain 293 334 IPR000467 GO:0003676
Pte4g00024 493 MobiDBLite consensus disorder prediction 243 260 - -
Pte4g00024 493 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 493 - -
Pte4g00024 493 MobiDBLite consensus disorder prediction 341 380 - -
Pte4g00024 493 MobiDBLite consensus disorder prediction 243 263 - -
Pte4g00024 493 ProSiteProfiles G-patch domain profile. 293 339 IPR000467 GO:0003676
Pte4g00024 493 SMART c3hfinal6 141 167 IPR000571 GO:0046872
Pte4g00024 493 MobiDBLite consensus disorder prediction 354 368 - -
Pte4g00024 493 Gene3D - 105 178 - -
Pte4g00024 493 Coils Coil 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00024 Pte-Chr4 455779 460323 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte4g00024 G-patch 2e-11 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00024 - - cave:132189401 650.973