Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte4g00007 ATGGCAGCAGACATTTTCACTCTGTACCCATACAATCCGATTCTCCACGGCTCTTCTTCTTGTGTCAATTTAAGGTATTCCCTTTTCATTTTCAGCTCAAATACCAGTCGCTATTCAAGAAGCAGAGCTGTAAACGGAGGAGGTGATGGAGGAGCAAGGGGACGCAGTGCTTCCAGCGTTGTACTGTCAACTCATTCCAACTCAATAATTCTCAAGTCCAATAGGAAGTCAAGGTATGGAAAGTTGCTCAACCCTTACGACAGTGATAGTGATTATGAAGATATAGACGAAGATGAGGACTGGTTGCCTGATGATGGCTTGGCTGAGATTTCTGATATTGATGTTAATCGGAAGATGGTAAAATCACAAAAAGTGGGGCTGCAAGAAAAAGGTCGGGGTCTAATATCATTTGACAATAGAAGTACAAAAAATTTTGGGAGAGAGCAAGTGAGTTCCTCCCTTGATGGCAGAGCCAAGCTTAGGAGTAAGCAGTTGAAGGAGGAAAAATATCCACAGCTTTCAGAAGATATTGATTGGGATGTGAAATGGATTCCTCTTCTTGATTACTTGTGCACATTTGGGTTCAAGGAATCCGATTTCATACATATGTATGGGAGGCACATGCCATCTCTTCAAATCAATGTTTGTTCAGCACAAGAACGACTGGGATACTTGATGAGTGTCGGTGTCAAACATAGAGATATAAGAAAAATCCTTTTAAGGCAGCCGCAGATTCTAGAGTACACGGTGGAGAAAACATTAAAGTCTCACATCGCTTTCTTACTGGATCTGGGCATTACAAATTCTAGAGTTGGACAAATAATTACTGCTGCTCCTTCACTGTTCTCATACAGTGTTGAAAACTCATTGAAACCCACAGTAAGATACTTAATTGAGGAAGTTGGCATCAAGGAAAAGGATTTGTGCAAGGTTATACAGCTGAGCCCTCAAATCTTGGTCCAGAGAATTGATATATCATGGAATACTCGATACATGTTTCTTGCAGAGGAGTTGGGAGCCCCCAAGCATAGCATAGTGAAGATGGTTACGAAGCATCCCCAGCTTCTCCATTACAGCATAGAAGAGGGACTACTCCCCAGGATAAACTTTTTGAGGAGCATAGGCATGAAGAATTCTGAGATTTTGAAAGTCTTGACTAGTCTTGCACAGGTTTTATCTCTTTCTCTGGAGAACAACTTAAAGCCCAAGTATATGTATTTGGTCAATGAACTGAAGAATGGGGTTCAATCCTTGATCAAGTATCCGGTGTATCTTAGCTTGTCTTTAGACAAAAGAATCCGTCCTCGCCATAGGTTCTTGGTAGCCCTAAAGAAAGCTCCGAAAGGACCATTTCCTCTAAGGCCATTGCTTCCAACTGATGAATCCTTCTGCCAGAAGTGGGCTGGGACCAGTTTGGATAAATATCTTGCATTTAGACAAAGCTTATTGCTCGATGATTTTGCTCAGAAATATAAAAGGAAAATGTGA 1488 0.414 MAADIFTLYPYNPILHGSSSCVNLRYSLFIFSSNTSRYSRSRAVNGGGDGGARGRSASSVVLSTHSNSIILKSNRKSRYGKLLNPYDSDSDYEDIDEDEDWLPDDGLAEISDIDVNRKMVKSQKVGLQEKGRGLISFDNRSTKNFGREQVSSSLDGRAKLRSKQLKEEKYPQLSEDIDWDVKWIPLLDYLCTFGFKESDFIHMYGRHMPSLQINVCSAQERLGYLMSVGVKHRDIRKILLRQPQILEYTVEKTLKSHIAFLLDLGITNSRVGQIITAAPSLFSYSVENSLKPTVRYLIEEVGIKEKDLCKVIQLSPQILVQRIDISWNTRYMFLAEELGAPKHSIVKMVTKHPQLLHYSIEEGLLPRINFLRSIGMKNSEILKVLTSLAQVLSLSLENNLKPKYMYLVNELKNGVQSLIKYPVYLSLSLDKRIRPRHRFLVALKKAPKGPFPLRPLLPTDESFCQKWAGTSLDKYLAFRQSLLLDDFAQKYKRKM* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte4g00007 495 PANTHER CGI-12 PROTEIN-RELATED 206 467 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 272 304 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 415 447 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 SMART mt_12 382 414 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 Gene3D Transcription termination factor 3, mitochondrial 245 482 IPR038538 -
Pte4g00007 495 FunFam Transcription termination factor MTERF9, chloroplastic 247 482 - -
Pte4g00007 495 Pfam mTERF 222 306 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 Pfam mTERF 298 442 IPR003690 GO:0003690|GO:0006355
Pte4g00007 495 Pfam mTERF 259 403 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte4g00007 Pte-Chr4 287105 290341 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte4g00007 mTERF 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte4g00007 K15031 - qsa:O6P43_013608 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte4g00007 4 287105 290341 Pte4g00007 4 287105 290341 RCT