Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02504 ATGGAACGGGATGATGTTAGTAGCAAATCTGTGTCCTTCGAAATTTCTAGCTCATCTCATGCACAGAACAAGTTGAGTAATTCTCAGAAAAGAAGCCACCGCAAAAGTGTTCAGTTTGATGAGAACTTATTCCAAGAGTCTAATCCTAGGCTGGTTTATATAAATGATCCAAAGAGGACAAATGACAAGTATGAGTTCACAGGAAATGAGATACGAACAAGCAAGTACACTTTGATTACATTCTTACCGAAGAATCTCTTCATTCAGTTTCATCGGGTTGCTTATTTGTATTTCTTAGCAATTGCTGCCCTTAACCAGCTTCCTCCGCTTGCTGTATTTGGGAGGACAGTGTCCCTTTTCCCTCTCCTTTTTGTTCTGTGTGTCACAGCTATCAAAGATGGATATGAAGATTGGCGTAGGCACAGGTCAGATAAGAATGAGAACAATCGAGAGGCTTTGGTTTTTCTATCCGGTGATTTCAGGTTGAAAAAATGGAAAAACATACAGGTAGGTGAGGTTGTAAAGATCCATGCTGATGAGACAATTCCATGCGACATGGTTTTGTTAGGCACAAGTGACCCCAGTGGTATCGCCTACATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCTCGCCAGGAAGTGGCTTCTGCAGTATCTGAAGGGTGCCTCGTCTCTGGCCTTATCAGATGTGAGCAACCCAACAGGAATATATATGAATTCACGGCCAACATGGAGTTCAATGGTCTTAAGTTTCCCCTCAGCCAATCAAACATAGTTTTACGTGGTTGTCAACTCAAGAACACAGAATGGATAATTGGTGTGGTGGTGTACGCTGGACAGGAAACAAAAGCGATGTTGAACAGTGCTGCTTCTCCTTCCAAGAGAAGCAAACTAGAGAGCTACATGAACAGGGAAACTCTCTGGTTGTCAGTTTTCCTATTTGTGATGTGTTTGGTAGTAGCAATTGGCATGGGCCTTTGGCTTACAAGACACAATGACCAGCTTGATACATTGCCTTACTACAGGAAGAGATATTTCTCGTATAATGGGCATAATGGTACGAAATACAAGTATTATGGAATACCAATGGAAACCTTTATTTCTTTTTTGAGTTCCATCATCGTGTTTCAGATCATGATACCAATATCTTTGTACATCACCATGGAGTTAGTTCGTTTGTGTCAGTCATATTTCATGATTGGAGATGATCACATGTATGATGCTAGCTCTGGGTCAAGGTTTCAGTGCAGATCCTTGAACATAAATGAGGATTTGGGTCAAATACGCTATGTATTTTCAGATAAGACTGGTACATTAACAGAAAACAAGATGGAATTCCGAAGAGCAAGTGTACACGGAAAGAACTATGGCAGCTCATTGGTCATGGATGATACTTGTACAGCATATAGTGGTAGAAAGAGGTGGAAGCTCCAATCTGAAGTTCCTGTTGATTCTGAACTCATAAATTTGTTGCACAAAGAGTCACATGAGCTTGATAGGATTGTTGCACACGAGTTTTTCTTGACATTGGCTGCATGTAACACCGTCATTCCAATTCTAAGTGGCCATGCATTTAGTTCTCAAACAAGTGGACCAGGTGAAGGCATGGAAGCTATAGAATATCAGGGAGAATCTCCTGATGAGCAAGCTCTAGTTGCTGCTGCCTCTGCTTATGGATATACCCTCTATGAGAGAACATCTGGACATATTGTCGTTGATGTCTTTGGTGAGAAACTAAGGTTGGATGTGCTGGGCCTTCATGAGTTTGACAGTGTGCGCAAAAGGATGTCTGTAGTTATTCGATTTCCCAACAATGTTGTGAAGGTGTTGGTCAAAGGTGCTGATAGCTCCATGTTCAGCATTTTACGAAATGGTGGCGAGACTGTTGATGATATATGGAGTGCAACTCAGAATCATTTGAATGAATATTCATCGCAGGGTTTACGTACTCTCGTAGTTGGCTCAAGGGATCTTTCTTGTGCTGAACTTGAGGAGTGGCAATGCATGTATGAAGATGCAAGCACTTCATTGACTGATAGGGCATTAAAGCTACGTCAAACTGCTGTGTTTATAGAAAGTAACTTGAATTTGCTTGGGGCTACTGGGATCGAGGACAAGTTACAAGATGGAGTGCCAGAAGCTATTGAGTCGCTCAGGCAAGCTGGGATAAAGGTGTGGGTTCTGACTGGGGACAAGCAAGAGACAGCTATTTCAATTGGTTTGTCATGTAAACTTCTGACTTCGGATATGCAGCAGATAATTATTAATGGTACGTCAGAACATGAATGCAAAAACCTTTTGAACGAGGCCATGTCCAAATATGGTGTGCGATCTTCTAGATCTGACAATCAGGTTCGCAAACCAAAAATGGACCCTGAGCATGTTTACGTTGAGATCCCCAATGGAATAAAGCCCTTTAGTATTTCTCAGTGCAGATCAGGGAAGGAAGTAACAAGTGCACCTCTTGCCCTGATAATTGATGGGAATAGTTTGGTGTACATTTTGGAGAAGGATTTAGAGTCTGAGCTATTCGACCTTGCCACTTTCTGCAGAGTGGTGCTTTGCTGTCGCGTTGCACCTTTACAGAAAGCAGGAATTGTTGATCTGATCAAGAGTCGTACTGATGATATGACATTGGCCATAGGTGACGGAGCAAATGATGTGTCAATGATCCAAATGGCTGACGTGGGCGTCGGAATATGTGGTCAGGAAGGGCGGCAAGCAGTTATGGCATCTGATTTTGCTATGGGACAGTTCCGATTCTTGAAGAGACTGCTTCTAGTTCATGGACACTGGAATTATCAGCGCATTGGTTACTTAATTCTCTACAACTTCTACCGCAATGCTGTTTTTGTATTGATGTTGTTTTGGTATGTATTATTGGCTGCATTTTCAACAACTTCTGCATTGACTGATTGGAGTAGTGTATTCTATTCCCTCTTGTACACTTCAATCCCTACCCTTGTTGTGGGTGTTCTGGATAAAGACCTAAGCGACACAACTCTCTTGCGTTATCCCAAACTATATGGAGCTGGGCATCGACAGGAGGCATACAATATGCGTTTGTTTTGGATTGCAATGATTGACACGTTATGGCAGAGTCTTGTTCTGTTTTATATTCCCTTATTCACTTTCAAGGATGGAGTGATCGATATTTGGAGCTTGGGCAGTTTGTGGACAATAGCAGTTGTTGTCCTTGTAAATTTTCACTTGGCAATGGATGTTAAACACTGGATATACCTCGTACATCTTGCTGTATGGGGTTCGATAATTATTACTTACGGCTGCATGGTTGTGTTAGATTCTATTCCTGTCTTTCCCAATTATTGGACCATCTATCATCTAGCTAAATCACCAACATATTGGACTACTATTTTACTCATCGCAGTAGTTGCATTGCTCCCCCGCTATGTTTGCATTGTTGTTCGTCACAGTTTCTGGCCTTCAGATATCCAGATAGCTAGAGAATGTGAAATACTGACAAGAAAAAATGAATATCCGGGGTCAAGGCAAGATCAAGGTTCTAGTTGA 3549 0.4173 MERDDVSSKSVSFEISSSSHAQNKLSNSQKRSHRKSVQFDENLFQESNPRLVYINDPKRTNDKYEFTGNEIRTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDKNENNREALVFLSGDFRLKKWKNIQVGEVVKIHADETIPCDMVLLGTSDPSGIAYIQTMNLDGESNLKTRYARQEVASAVSEGCLVSGLIRCEQPNRNIYEFTANMEFNGLKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETLWLSVFLFVMCLVVAIGMGLWLTRHNDQLDTLPYYRKRYFSYNGHNGTKYKYYGIPMETFISFLSSIIVFQIMIPISLYITMELVRLCQSYFMIGDDHMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLVMDDTCTAYSGRKRWKLQSEVPVDSELINLLHKESHELDRIVAHEFFLTLAACNTVIPILSGHAFSSQTSGPGEGMEAIEYQGESPDEQALVAAASAYGYTLYERTSGHIVVDVFGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNVVKVLVKGADSSMFSILRNGGETVDDIWSATQNHLNEYSSQGLRTLVVGSRDLSCAELEEWQCMYEDASTSLTDRALKLRQTAVFIESNLNLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTSDMQQIIINGTSEHECKNLLNEAMSKYGVRSSRSDNQVRKPKMDPEHVYVEIPNGIKPFSISQCRSGKEVTSAPLALIIDGNSLVYILEKDLESELFDLATFCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLILYNFYRNAVFVLMLFWYVLLAAFSTTSALTDWSSVFYSLLYTSIPTLVVGVLDKDLSDTTLLRYPKLYGAGHRQEAYNMRLFWIAMIDTLWQSLVLFYIPLFTFKDGVIDIWSLGSLWTIAVVVLVNFHLAMDVKHWIYLVHLAVWGSIIITYGCMVVLDSIPVFPNYWTIYHLAKSPTYWTTILLIAVVALLPRYVCIVVRHSFWPSDIQIARECEILTRKNEYPGSRQDQGSS* 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02504 1182 ProSitePatterns E1-E2 ATPases phosphorylation site. 440 446 IPR018303 -
Pte3g02504 1182 Gene3D - 128 293 - -
Pte3g02504 1182 Gene3D - 544 684 IPR023299 GO:0000166
Pte3g02504 1182 SUPERFAMILY Calcium ATPase, transmembrane domain M 66 1149 IPR023298 -
Pte3g02504 1182 Pfam Phospholipid-translocating ATPase N-terminal 52 117 IPR032631 -
Pte3g02504 1182 SFLD Haloacid Dehalogenase 422 938 - -
Pte3g02504 1182 MobiDBLite consensus disorder prediction 10 26 - -
Pte3g02504 1182 Pfam Cation transport ATPase (P-type) 550 625 - -
Pte3g02504 1182 SUPERFAMILY HAD-like 433 933 IPR036412 -
Pte3g02504 1182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1164 - -
Pte3g02504 1182 NCBIfam HAD-IC family P-type ATPase 858 973 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g02504 1182 NCBIfam HAD-IC family P-type ATPase 371 461 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g02504 1182 NCBIfam HAD-IC family P-type ATPase 694 752 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g02504 1182 SUPERFAMILY Calcium ATPase, transduction domain A 149 290 IPR008250 -
Pte3g02504 1182 CDD P-type_ATPase_APLT_Dnf-like 68 1047 - -
Pte3g02504 1182 MobiDBLite consensus disorder prediction 1 36 - -
Pte3g02504 1182 FunFam Phospholipid-transporting ATPase 546 681 - -
Pte3g02504 1182 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 444 717 IPR023299 GO:0000166
Pte3g02504 1182 Pfam Phospholipid-translocating P-type ATPase C-terminal 915 1155 IPR032630 -
Pte3g02504 1182 Gene3D - 701 927 IPR023214 -
Pte3g02504 1182 SFLD p-type atpase 422 938 IPR044492 -
Pte3g02504 1182 Pfam E1-E2 ATPase 150 396 - -
Pte3g02504 1182 NCBIfam phospholipid-translocating P-type ATPase 66 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02504 Pte-Chr3 45740945 45749283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02504 3 1166 Primary Pumps ATPases AT5G04930 55.860 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02504 K14802 - qsa:O6P43_026360 1865.51