LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g02499	ATGAGTGGTAGAGAACAGGGCAGAGGAAGAGAAGATGCGCAATGTGAAGAATCAGTTTCTCATGGGTCTGCGGAATTAGAGTCCAGGCAAAATGGGTCTGCCGCAACAAAATCGCTGACAATTGATGAGAACCTTTTGGTTGACCCAAAATTGCTTTTCATTGGGTCCAAAATCGGTGAAGGAGCTCATGGGAAAGTATATGAAGGAAGGTATGGAGATCAGATAGTTGCAATCAAAGTTCTCAATCGTGGAAGCACTAACGAACAAGGAGCTGCACTTGAAAATCGTTTTATTCGGGAAGTTAATATGATGTCCCGTGTGAAACATGAGAATCTTGTGAAGTTCATTGGAGCATGTAAGGATCCTTTGATGGTAATAGTCACTGAGCTGTTACCTGGGATGTCACTTCGTAAATATTTGGTCAGTTTACGTCCTAAAAAGTTAGACCTGCACGTGGCTCTACAGTTTGCCCTTGATGTTGCTCAAGCCATGGATTGCCTGCATGCCAACGGGATCATTCATAGAGATCTGAAACCTGATAATTTGCTGCTCACTGCAAATCAGAAGTCTGTTAAGCTTGCAGACTTTGGTCTGGCTAGAGAAGAATCTGTAACTGAAATGATGACTGCAGAAACAGGAACATACCGCTGGATGGCTCCTGAGTTATACAGTACAGTAACATTACGCCAGGGAGAGAAGAAGCATTATAACAACAAAGTTGATGTATACAGCTTTGGAATCGTCTTGTGGGAATTATTAACGAATCGTATGCCTTTTGAGGGCATGTCAAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTGCCCTGCCAGATGATATTTCCCCTGATCTGGTCTTTATCATTCAGTCATGTTGGGTTGAAGACCCTAACCTGAGACCAACCTTTAGCCAAATCATCCGGATGCTTAATACATTTCTCTTCACACTCCCTCCGCCATTACCTTCTTTTCCGGAGACTGATGCCAATGAAGCTGATGCAGCAGCAACAAGCAATGGAACCATGTCTGAGTTCTCTGCTCGTGCTCGAGGGAAGTTTTCTTTTATTCGTCATTTGTTTGCTGCTAAGAGGGCCAAGAACTCACGGTGA	1119	0.4379	MSGREQGRGREDAQCEESVSHGSAELESRQNGSAATKSLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLNRGSTNEQGAALENRFIREVNMMSRVKHENLVKFIGACKDPLMVIVTELLPGMSLRKYLVSLRPKKLDLHVALQFALDVAQAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPALPDDISPDLVFIIQSCWVEDPNLRPTFSQIIRMLNTFLFTLPPPLPSFPETDANEADAAATSNGTMSEFSARARGKFSFIRHLFAAKRAKNSR*	373

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte3g02499	372	PRINTS	Tyrosine kinase catalytic domain signature	128	141	IPR001245	GO:0004672\|GO:0006468
Pte3g02499	372	PRINTS	Tyrosine kinase catalytic domain signature	284	306	IPR001245	GO:0004672\|GO:0006468
Pte3g02499	372	PRINTS	Tyrosine kinase catalytic domain signature	240	262	IPR001245	GO:0004672\|GO:0006468
Pte3g02499	372	PRINTS	Tyrosine kinase catalytic domain signature	166	184	IPR001245	GO:0004672\|GO:0006468
Pte3g02499	372	ProSiteProfiles	Protein kinase domain profile.	52	317	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte3g02499	372	MobiDBLite	consensus disorder prediction	1	18	-	-
Pte3g02499	372	CDD	STKc_MAP3K-like	58	313	-	-
Pte3g02499	372	ProSitePatterns	Protein kinases ATP-binding region signature.	58	79	IPR017441	GO:0005524
Pte3g02499	372	FunFam	Kinase suppressor of Ras 1	41	131	-	-
Pte3g02499	372	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	49	316	-	-

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g02499	Pte-Chr3	45676321	45680165	Transposed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte3g02499	40	371	MAP Kinase Kinase Kinase	AT5G01850	73.950	0.0	522

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pte3g02499		PK_Tyr_Ser-Thr	4.8e-61	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g02499	-		-	qsa:O6P43_016485	594.734

Showing 1 to 1 of 1 entries

Previous1Next