Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02494 ATGGACGCGGTTTCTACTTGTCGACGACACAACTCGGAACGAAAAGGCACGTCACTCGCAAGTTCCCTTCACTACACCAAGCACCAGCTGTATAAGACTAGGCTAGACTGGCTCTTCCTTTCATCTTCAATTTCAACTACATTTTGCTCCGCCTTTTTCTCCTCCTCCACAAATCCTCATCCTTGCCTTTGGGAGATTCGCGACTCCTTTTTGCAAAAAAACAAAAATATAGGGAATGTGGAGATGTACCTGATATTCCAGAAGTCCATCTCTAAGGTTGACGGGCTAGTGGCTGTGGCCGCAGCCGCTCATGAATTGCCCTTATTTCTACTTCATGAAATCAAATGTCTAACTCACAGCCCCTTTGAGTTCTATACTCGAGTTCCAGACGAAGCTACAATTAAACGAGAAAAGAGCATATCAAAACATGATGTTTGTGAAGATGAACCAATGAAACAGAAACAGCATGAGCTGGTGCAGCGGTATGAAATGGGAAGATTGTTAGGCCAGGGAACATTTGCAAAGGTTTACTTTGCAAGAAATCGTAGAACTGGCCTGAGTGTGGCAATTAAGGTAATTGACAAAGACAAGATCTTGAAATCTGGAATGACTGACCAGATTAAGCGAGAAATATCGATCATGAGGTTGGTTCCGCATCCAAATATAGTTGAGTTTTATGAAGTGATGGCTAGCAAAAACAAGATTTACTTTGTCATGGAGTATGCCAAAGGCGGTGAGCTCTTTGCCAAGGTGGCTAAGGGAAAGCTCGGGGAAGACGAGGCCAGAAAATACTTTCACCAACTGATCAGTGCTGTCGATTACTGTCATAGCCGAGGCGTGTTTCACCGGGACCTGAAACCAGAAAATCTATTGCTAGATGAAAATGGGAACTTAAAAGTCACAGACTTTGGACTGAGTGCCCTTGCAGAATGTAAGTGGCACGATGGCTTGCTCCATACTATTTGTGGTACACCTGCTTATGTTGCCCCTGACGTGATCAGCAGAAAGGGTTATGATGGGTCCAAAGCAGATATTTGGTCCTGTGGGGTGATCTTATATGTTCTATTAGCTGGATATCTACCATTCCGTGATTCAAACCTGATAGAGTTATATAAAAAGATTGGCCAAGGGGAGTTCAAATTCCCTAACTGGTTTGCACCTGACATTCAGAGTTTGTTATCCAAGATCTTGGATCCCAACCCCAACAGCCGGATATCAACTTCTGGAATCATGGAAAATTCATGGTTCTTGAAGGGATTAAGTACAAATGGTGTCTACACTGAGATTGAAGAAAAAGATCCTGCCCCACTGGATGTTGATAGAGTTTCCGGACTACATAAGAATGGCAGTTCCAACGTCAAGTTAGACCAAGTGATAAAACCTTGTAACCTTAATGCTTTCGATATCATCTCATATTCAGCAGGTCTTGACCTGTCTAGCCTGTTTGAAGACACTCACTACAAGAATGAATTGCGGTTTACATCCAACAAACCTGCTTCAATTATCATCTCGAAGCTGGAAGACATTGCCATGCGTCTTGGTTTGAAAATCCAGAAGAAAAACGAAGGCTTGTTGAAATTGGAAGGTTCCATGGAAGGTAGAAAGGGGGCCTTGGCTATTGATGTTGAAATCTTTGCGATTACCCCTTTTTTCCATATAGTAGAGATAAAAAATTCAAATGATGATACATTGGAGTATCAGAATATTATGAAACAGGAACTAAGACCAGCACTGAAGGACATCATTTGGACTTTGCAAGGGGAGCAGCCTCAGCAACTCCACGAGCAACTGGATCAGCAGGACGTATAA 1809 0.4279 MDAVSTCRRHNSERKGTSLASSLHYTKHQLYKTRLDWLFLSSSISTTFCSAFFSSSTNPHPCLWEIRDSFLQKNKNIGNVEMYLIFQKSISKVDGLVAVAAAAHELPLFLLHEIKCLTHSPFEFYTRVPDEATIKREKSISKHDVCEDEPMKQKQHELVQRYEMGRLLGQGTFAKVYFARNRRTGLSVAIKVIDKDKILKSGMTDQIKREISIMRLVPHPNIVEFYEVMASKNKIYFVMEYAKGGELFAKVAKGKLGEDEARKYFHQLISAVDYCHSRGVFHRDLKPENLLLDENGNLKVTDFGLSALAECKWHDGLLHTICGTPAYVAPDVISRKGYDGSKADIWSCGVILYVLLAGYLPFRDSNLIELYKKIGQGEFKFPNWFAPDIQSLLSKILDPNPNSRISTSGIMENSWFLKGLSTNGVYTEIEEKDPAPLDVDRVSGLHKNGSSNVKLDQVIKPCNLNAFDIISYSAGLDLSSLFEDTHYKNELRFTSNKPASIIISKLEDIAMRLGLKIQKKNEGLLKLEGSMEGRKGALAIDVEIFAITPFFHIVEIKNSNDDTLEYQNIMKQELRPALKDIIWTLQGEQPQQLHEQLDQQDV* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02494 602 CDD CIPK_C 465 579 - -
Pte3g02494 602 ProSiteProfiles NAF domain profile. 459 483 IPR018451 GO:0007165
Pte3g02494 602 CDD STKc_SnRK3 161 415 - -
Pte3g02494 602 FunFam Non-specific serine/threonine protein kinase 459 583 - -
Pte3g02494 602 FunFam Non-specific serine/threonine protein kinase 153 241 - -
Pte3g02494 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Pte3g02494 602 ProSiteProfiles Protein kinase domain profile. 162 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02494 602 ProSitePatterns Protein kinases ATP-binding region signature. 168 191 IPR017441 GO:0005524
Pte3g02494 602 Pfam NAF domain 461 519 IPR004041 GO:0007165
Pte3g02494 602 Gene3D Kinase associated domain 1, KA1 464 584 - -
Pte3g02494 602 SUPERFAMILY Protein kinase-like (PK-like) 159 417 IPR011009 -
Pte3g02494 602 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 153 579 - -
Pte3g02494 602 Pfam Protein kinase domain 162 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02494 602 SMART serkin_6 162 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02494 602 Gene3D Transferase(Phosphotransferase) domain 1 152 463 - -
Pte3g02494 602 FunFam Non-specific serine/threonine protein kinase 155 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02494 Pte-Chr3 45629831 45634351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02494 151 591 CBL-interacting serine-threonine protein kinases AT5G58380 59.912 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte3g02494 Pkinase 9.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02494 K07198 - cave:132191415 662.914