Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02486 ATGAGGACATCTTTCACTGACCTGCTTGCCAAAAACATAATCGACATGGATGATAACTGGGGACAATCAAACTTCAAAAATAACCAAGTTGCTCTCGAAATTCCCAAGTTCAAATCATTTCAACCCTCTTCATTGCCTATCTCCCCATCTCCTATCTCACCAACTTCTTATTTTGCTGCCTCACCAGCTGGCTTCAGCCCAACCGATTTCTTAAACTCGTCTTTTTTTCTTGCTTCTCCGACTATACATGCATCTCCTGCTGCTGGGGCTCTTGCTGTTGATCAAAGCTTTAACTGGAGAAGCAATTCAGATGAAAATCAGATACAGAACAAAAAACAGACCAAAGAGGAGGAACTTGACTATTACGACTTCTCTTTCCAAACTCACACAAAGTCTGCTTCAAAATTTGAATCTTGTTCAAATTTCTTTCAAGGGCAGCAGCAACCGGTTGAGAAACAAGAGACATGGAAATTCAATGAACAGATAAAGCAAGCAGAACTTTCAGCACAAACGCTAGGAACCAAATCAAACAATCTACCAATTGAAACCTCCTGCACGCAATCCAATATGGAAAAGAACAATCCAGCTCCCCAGTCTGGTTTTGGGTATACTCAATCAGCTCATTCAATCAGAGAGCAGAAAAGGTCAGAAGATGGCTTCAACTGGAGAAAATATGGTCAGAAACAAGTTAAAGGAAGCGAAAATCCTCGAAGCTATTACAAATGCACTTATCCAGGTTGTGCAATGAAGAAGAAAGTGGAGAGGTCTTTGGAGGGGCATGTAACTGAAATTGTCTACAAGGGAAGCCACAATCACCCAAAGCCTCAGCCTAACAGACGAACAAGTTCTCATCCTTCATCATCATGCACCAACTCTTGTATCTCTGACCAGTCAGTTGCGACTCTAGGGAACATGAAAATGGAAGTCACGTTGCAAGAAGATTCTTCTGTATCTCTCTGCGAAGAAGACCGAAAATCACAAACCAGTAATTCAATAGATTATGATGAGGAATTTGAACCTGATGCCAAAAGATGGAAAGGAGATGAAAATGAGAGTTATTCAACGGCTGGGAGTAGAACGGTGAGGGAACCGAGAGTTGTAGTTCAAACTACAAGTGAAATCGATATACTTGACGATGGTTATAGATGGAGGAAATATGGGCAGAAAGTCGTCAAAGGCAATCCAAACGCAAGGAGCTACTACAAGTGCACATATGCAGGCTGTTCAGTGAGGAAACATGTGGAGCGAGCCGCCAATGATTTGAGGTCTGTGATCACAAGTTATGAAGGGAAACACAACCATGACGTCCCTGCTGCACGAGGCATTGGTGGTTATGCTGCAAACAAAGCTTCATTCATTGATAATACCAGCAATGCAATCATGCCAATAAGACCGTCAGCCATGACAAGTTACTCTTGTCAATCAAGTTTTGCAAATTCTCTCAACCACACAAGGGAACCAATTTCTTCAAGTCAAGAACCAGCTCAGCTTGAAGTGCTGCAGAACCCTGGGAACTTCGGATATTCAAATTTCAGAAGGTTGATTGATTCATACATTGACCAATAA 1566 0.4195 MRTSFTDLLAKNIIDMDDNWGQSNFKNNQVALEIPKFKSFQPSSLPISPSPISPTSYFAASPAGFSPTDFLNSSFFLASPTIHASPAAGALAVDQSFNWRSNSDENQIQNKKQTKEEELDYYDFSFQTHTKSASKFESCSNFFQGQQQPVEKQETWKFNEQIKQAELSAQTLGTKSNNLPIETSCTQSNMEKNNPAPQSGFGYTQSAHSIREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTYPGCAMKKKVERSLEGHVTEIVYKGSHNHPKPQPNRRTSSHPSSSCTNSCISDQSVATLGNMKMEVTLQEDSSVSLCEEDRKSQTSNSIDYDEEFEPDAKRWKGDENESYSTAGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTYAGCSVRKHVERAANDLRSVITSYEGKHNHDVPAARGIGGYAANKASFIDNTSNAIMPIRPSAMTSYSCQSSFANSLNHTREPISSSQEPAQLEVLQNPGNFGYSNFRRLIDSYIDQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02486 521 Pfam WRKY DNA -binding domain 217 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 Pfam WRKY DNA -binding domain 378 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 SUPERFAMILY WRKY DNA-binding domain 369 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 MobiDBLite consensus disorder prediction 266 292 - -
Pte3g02486 521 MobiDBLite consensus disorder prediction 275 292 - -
Pte3g02486 521 MobiDBLite consensus disorder prediction 210 224 - -
Pte3g02486 521 MobiDBLite consensus disorder prediction 192 234 - -
Pte3g02486 521 ProSiteProfiles WRKY domain profile. 211 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 FunFam WRKY transcription factor 57 363 437 - -
Pte3g02486 521 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 FunFam WRKY transcription factor 204 276 - -
Pte3g02486 521 SUPERFAMILY WRKY DNA-binding domain 211 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 SMART WRKY_cls 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 SMART WRKY_cls 377 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 Gene3D WRKY domain 202 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 Gene3D WRKY domain 362 438 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g02486 521 MobiDBLite consensus disorder prediction 192 209 - -
Pte3g02486 521 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 134 474 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02486 Pte-Chr3 45552304 45554904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02486 9 509 WRKY Transcription Factor Family AT2G38470 43.455 5.90e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g02486 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02486 K13424 - qsa:O6P43_026301 586.645