Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02485 ATGCATTTGAAGCCGAGCATGATGCGTTCAAAGCTAAACAAGCAAGGTATCCGAGGTCCCAAGCCTGCCTTTCTTCTCGGAAACATCCCACATATCAGGAAGATGCAGTCCAAAGTTCACAAGCCTCCTGTTAAACCAGGCCAGGTCTCTCATGAATGGCCCCACTATCTCTTCTCTTTCTACGATAAGTGGATTCAAGAATATGGAAAAACTTTCACTTTTTCGCTTGGAACCATGCAAGTGCTGTATGTGTCTGATCTTGGACTGGCGAAGCAATTATCTCTGTACACTTCTATGGATTTGGGCAAGCCTCTTTACCAGCAGAAAGAGCGTGGTGCTCTACTAGGGACTGGTATATTGACCTCAAATGGACCTATTTGGGCTTACCAGAGGAAAATGATGCAGCCAGAACTATTTACAGAGAAAGTGAAGAACATGCACGATCTGATGCTGGAATCTGTGACTTTGCTTGTGAATAAATGGGATAGCCAGATCGACAGAAAGCAAGGCGTGGGGTATTTAAGAATAGAGGATGACCTGAAAATTTTCTCGGCTGATGTAATTACAAGAGCTTGTTTTGGAAGTAATTACTCCGAAAGCCAAGAGATCTTCCTCAGGATTGGAGATCTCAGAAAAATTATGGTAAAGAAGAGCTGGCTTTTGGGTCTTCCTGGTTCAAGACATCTCCCAATAAAGAGCAATCGAGAGACATGGAGGTTGGAGAAGGAGATCCGGAAGCTGATAATGAATGTGGTTGAGAAGAGGGAGAAGTCGACTGAGGAGCACAAGGACCTCTTGCATGTTATCATGGAGGGAGCCAAAGGCTGTAATTTGGACAAAGTCGATGTGGCCAGATTCATTTCTGACAACTGCAAGAATGTGTACATCGCTGGTGACGAGACTACTGGGATGACTATTGCCTGGACTCTACTTCTCTTAGCCGCCAATCCAGAATGGCAAAACCGCCTTCGAGAGGAGGTCTTAGAAATCTCTGGAGACCAAAGAACTCCTGATTATGAAAAGCTACGCAAGATGAAAGTGCTAACAAAGGTCATTCAAGAGTCGATGCGCCTTTATCCAACAGTTACATTCATGGCAAGAGAAGCTCTGCAAGATCTTGAATTTGGGGACTTGAAAGTCCCAAAAGGTGTGAGCATATGGTTGCCAATCTACAAGTTTGGGAGGGATAAAGAGTTATGGGGTCCAGATGTAGATGAGTTCAAACCAGAGAGATTTGCAAACGGAGTTGCCGGTGCTTGCAAAATCCCACAACTCTACATACCCTTTGGCGGTGGACCTCGCATATGTATTGGAATGAACTTAGCCATGATGGAGATCAGGCTTGCCATTGCTGTTCTTGTATCTAAATTCTCATTTTCAGTTCCATCAGATTACTGCCACTCACCTGCATTCAGATTCATCATTCAACCAGAGAATGAACTCAACCTCGTATTGAAAAGGATTTAA 1467 0.4417 MHLKPSMMRSKLNKQGIRGPKPAFLLGNIPHIRKMQSKVHKPPVKPGQVSHEWPHYLFSFYDKWIQEYGKTFTFSLGTMQVLYVSDLGLAKQLSLYTSMDLGKPLYQQKERGALLGTGILTSNGPIWAYQRKMMQPELFTEKVKNMHDLMLESVTLLVNKWDSQIDRKQGVGYLRIEDDLKIFSADVITRACFGSNYSESQEIFLRIGDLRKIMVKKSWLLGLPGSRHLPIKSNRETWRLEKEIRKLIMNVVEKREKSTEEHKDLLHVIMEGAKGCNLDKVDVARFISDNCKNVYIAGDETTGMTIAWTLLLLAANPEWQNRLREEVLEISGDQRTPDYEKLRKMKVLTKVIQESMRLYPTVTFMAREALQDLEFGDLKVPKGVSIWLPIYKFGRDKELWGPDVDEFKPERFANGVAGACKIPQLYIPFGGGPRICIGMNLAMMEIRLAIAVLVSKFSFSVPSDYCHSPAFRFIIQPENELNLVLKRI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02485 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pte3g02485 488 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 SUPERFAMILY Cytochrome P450 19 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 Gene3D Cytochrome P450 5 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g02485 488 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 477 - -
Pte3g02485 488 Pfam Cytochrome P450 55 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02485 Pte-Chr3 45528636 45531111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02485 89 479 Cytochrome P450 AT5G24900 42.289 1.94e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02485 K24544 K26482 qsa:O6P43_033311 580.482