Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02476 ATGAAGACAGAATTGGCTCATGGGGGAAGGAGTTTGAAGAAAAGACGCAATGGAAGTGACTCCGTAGTTGATACTCTCGAAAAGTGGAAGAGATATCACAGTCAACTTCAAGGTGTCAAAAATGGAGAGAAGATGATCGACAGAGTTCCAGCCAAAGGGTCAAAGAAAGGGTGTATGAGAGGCAAAGGTGGACCACAGAATTCAGATTGCAAGTACAGAGGTGTGAGGCAGAGGACTTGGGGTAAGTGGGTTGCTGAAATCCGAGAGCCTATAAAGCATAAGCATAAAAAGGCCAATAGGCTTTGGCTTGGAACATTCTCCACCGCACGGGAAGCTGCATCGGCATATGATGAAGCTGCAAAGGCTATGTATGGCCCTAATGCACGTCTCAACTTCACAGATCATCTGCCGGACTCAATTGGTTCTGAGATGTCATCTTCAGGAACAATCCAACGATCTTACAGTGGTGAATCTACAGGCACATCTGAAGGTTTTGTGCCAGCTGAGGCAGAGGAAGACAACATGAATGCTCTTTGTCAATCTCCAAAGGACAGAACAAATTGTTCTGAGGTTGGCATGTTACAGGAAGTAGAGAGATCAAGGAAGGAATGTTATGAGGATCTTGTTGATGATAGAATGTTTGAGAATTTCAATGGAATTTGCACTGGCCATAATGTGTTAGGCATTGGTCCCAACAAATCTATAGATACTGACATCAATGGGGATTCCAGAGCAAAACTTAGATTTCCTGATGTCATTGATTATGAAATTCTCACAGAGGGTAAACAATGTCTTGGCAACTTAAGATATTATGGCTGCTTGGATTATAAGCAAGCAGAACTGGATTGTGATTTAGGAGATGCTTACAAGCAATCTGGAGATGTCAAACATGATGCACTCTTGGCTAAGGAAGAGAAGGACAAACCATGCCAGGATTCAGGACAGAGTTGCTATGATTGCACAAGCATTAGCTTTCATCACTCAGAAACTGTGCAAGGTGGATCTTCAAGTTCTGTTGGGACGAAGAAGCCGGACATGACACCATTTGAAGCAGAATTTGGAGGATGCAGTGATTACAACAGTCTCAACTGTAGCTGTGCATGCATGCACAATGAGATTGTGAGTTTGCATTGCAAGCCTACCAATGATGTCATAACTGAGGCTGCTGAAGTTGTAGGCAATTGTTGCAGGGATACAGTACTTTCCGCCGCCACAAGCATTGACAGTTTCAGCAAAGCAAGTGATACTTTCCATGGAAGAATGCCCGAGACTGAGACTTCTTTAGCTTCTATTAGTATCAGAAGCTCACAATTGCATGAGAAGGAAAAAAATGACTTCCATTATAACCAACTTGGGACAACACATGATTTCTCTCAGAACAGTGAGAACCCAGAATCAGAACTGCTTTATCATTTAAAGCTGATGCAGGAAGCAGACATGGGATTAGGTCCAGATTATAATGTCTTGAGACCAGATTATGATTATGGCTTATTGGAAGAGCAAGGATTACTCAATTTGTATTTTCCTTTGATGGGTGCTAGAGATGTCTAA 1551 0.4255 MKTELAHGGRSLKKRRNGSDSVVDTLEKWKRYHSQLQGVKNGEKMIDRVPAKGSKKGCMRGKGGPQNSDCKYRGVRQRTWGKWVAEIREPIKHKHKKANRLWLGTFSTAREAASAYDEAAKAMYGPNARLNFTDHLPDSIGSEMSSSGTIQRSYSGESTGTSEGFVPAEAEEDNMNALCQSPKDRTNCSEVGMLQEVERSRKECYEDLVDDRMFENFNGICTGHNVLGIGPNKSIDTDINGDSRAKLRFPDVIDYEILTEGKQCLGNLRYYGCLDYKQAELDCDLGDAYKQSGDVKHDALLAKEEKDKPCQDSGQSCYDCTSISFHHSETVQGGSSSSVGTKKPDMTPFEAEFGGCSDYNSLNCSCACMHNEIVSLHCKPTNDVITEAAEVVGNCCRDTVLSAATSIDSFSKASDTFHGRMPETETSLASISIRSSQLHEKEKNDFHYNQLGTTHDFSQNSENPESELLYHLKLMQEADMGLGPDYNVLRPDYDYGLLEEQGLLNLYFPLMGARDV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02476 516 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 205 - -
Pte3g02476 516 MobiDBLite consensus disorder prediction 142 162 - -
Pte3g02476 516 CDD AP2 70 135 IPR001471 GO:0003700|GO:0006355
Pte3g02476 516 Gene3D AP2/ERF domain 70 134 IPR036955 GO:0003700|GO:0006355
Pte3g02476 516 SUPERFAMILY DNA-binding domain 71 134 IPR016177 GO:0003677
Pte3g02476 516 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g02476 516 SMART rav1_2 71 139 IPR001471 GO:0003700|GO:0006355
Pte3g02476 516 MobiDBLite consensus disorder prediction 142 164 - -
Pte3g02476 516 FunFam Ethylene-responsive transcription factor 2 70 134 - -
Pte3g02476 516 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Pte3g02476 516 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Pte3g02476 516 ProSiteProfiles AP2/ERF domain profile. 71 133 IPR001471 GO:0003700|GO:0006355
Pte3g02476 516 Pfam AP2 domain 70 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02476 Pte-Chr3 45431605 45433853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02476 13 177 AP2-EREBP Transcription Factor Family AT2G40340 47.337 8.63e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g02476 AP2 4.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02476 - - qsa:O6P43_016543 301.982