Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02467 ATGGAAGAAAGCCATGGTTCTGAATGCTCAAAGGCAAACCTATCAGACCAAAACAAAGACAGGGTACGAAATAGTACTGAAGGAAATGAAGATGAAAGTAAGCCGACTAACGGACGAAGCTCCAGCAGTAGCACTGTGGAAGAGAATGAGAAGAAGGCATCAGTCAGACGCTACGTTAGATCCAAGTTGCCGAGGTTAAGGTGGACGCCGGATCTTCATAACAGATTTGTTCTTGCTATTCAAAGACTTGGGGGACAAGATAGGGCAACGCCTAAGTTGGTTCTTCAGTTGATGAATATCAAAGGGCTAAGTATTGCTCATGTCAAGAGCCATTTACAGATGTATAGAAGCAAAAAGACTGATGACCCAGATCAAGTTCATAGGCCTCTCGTCGAAGATGGAGATCATAAAATTTTATCTAACCTCAGCCAGCTTCCTATCATCCAAAGATATAACCAAATCCATTCAAACCTCAGATATGCAGATACTTCATGGGGTGGTTGTGACAAACTCATGATGCACAGAACCTTTGTAGGTCGGAATTCAATGGGAGAATCACAAGCTGGATGTTGTCTCAGGATGTTCGGAAAAAGTAATTTCAGTTGGAGTAATGGCAATGTCGTTATGGGCAGTTGCTCTATTGATGGACATTCAATTAGATCAATAACACAGGGATCAAAGGAAAAATTGTTATCATTTGATACGGATAATAGGCCACTTCTCGCACAAGGACTGCCATGTTTCAGAGATACAGCCCTTTCAGATATCAACTCAGGAACTGGTCTGCAAGATCAGACGGTTCTGAAGAGGAAGACTTGGAATTGTGAGCTTGATTTGGATCTTTCACTCGGACCAATAAGGAGGAATAACAATGTTGTAGATGATGGCAAGAATTTGGAAGACAACGAAATAGATAGTAACCTGTCCTTGTCTTTGTACTCTTCAACTTCAAATGTTAGTATCTGCAGATCAAAGGAAGAACAAGGAAATGTTAAGGAGCATGCAGGAAAAGCGAGTACTTTGGATCTTACTATATGA 1038 0.4123 MEESHGSECSKANLSDQNKDRVRNSTEGNEDESKPTNGRSSSSSTVEENEKKASVRRYVRSKLPRLRWTPDLHNRFVLAIQRLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKTDDPDQVHRPLVEDGDHKILSNLSQLPIIQRYNQIHSNLRYADTSWGGCDKLMMHRTFVGRNSMGESQAGCCLRMFGKSNFSWSNGNVVMGSCSIDGHSIRSITQGSKEKLLSFDTDNRPLLAQGLPCFRDTALSDINSGTGLQDQTVLKRKTWNCELDLDLSLGPIRRNNNVVDDGKNLEDNEIDSNLSLSLYSSTSNVSICRSKEEQGNVKEHAGKASTLDLTI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02467 345 NCBIfam myb-like DNA-binding domain, SHAQKYF class 64 119 IPR006447 GO:0003677
Pte3g02467 345 MobiDBLite consensus disorder prediction 1 34 - -
Pte3g02467 345 MobiDBLite consensus disorder prediction 1 55 - -
Pte3g02467 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 155 IPR046955 GO:0003700
Pte3g02467 345 Gene3D - 63 120 - -
Pte3g02467 345 FunFam Myb family transcription factor 62 120 - -
Pte3g02467 345 Pfam Myb-like DNA-binding domain 66 116 IPR001005 -
Pte3g02467 345 SUPERFAMILY Homeodomain-like 63 119 IPR009057 -
Pte3g02467 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 120 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02467 Pte-Chr3 45251625 45253509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02467 55 164 G2-like Transcription Factor Family AT2G42660 56.364 5.29e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte3g02467 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02467 - - tcc:18597485 270.011