Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02466 ATGGCTACCTCAGAGGCCTACATAGCACATTTGCCGGGTGTTCCCCCATGGCTAAACAAAGGGGACAACGCATGGCAATTGACAGCAGCTACTCTCGTGGGTCTTCAGAGCATGCCAGGATTAGTTATCCTCTATGCCAGCATAGTGAAGAAGAAATGGGCAGTTAACTCTGCTTTCATGGCTCTCTATGCCTTTGCTGCCGTTCTAATTTGTTGGGTACTTCTCTGCTACCGCATGGCTTTTGGAGACAAACTCTTACCTTTCTGGGGCAAAGGTGCTCCGGCGTTAGGCCAAAAATACCTTATACAACAAGCTCAAGTCCCTGAAAGTACACAGTTCTACAGCAATGGCACAGTTGAGACACCAAGAGATGATCCCTTATTCCCCATGGCCTCACTTGTCTATTTCCAGTTCAATTTTGCTGCTATCACTCTTATATTGTTAGCAGGGTCTGTTCTTGGAAGAATGAACATCAAGGCCTGGATGGCTTTTGTTCCCCTTTGGCTTATCTTCTCATACACTGTTGGCGCCTTCAGTCTGTGGGGTGGTGGCTTTCTCTACCACTGGGGTGTCATTGATTACTCTGGCGGTTATGTCATACACCTTTCCTCTGGAATCGCTGGTTTCACCGCAGCTTATTGGGTTGGGCCAAGGATAAAGAGTGATAGAGAGAGGTTTCCACCTAACAATGTGCTGCTGATGCTTGCTGGTGCTGGACTACTATGGATGGGATGGTCTGGATTCAATGGTGGAGCACCTTATGCAGCAAGTATTGCAGCTTCTATGGCTGTGTTGAACACAAATATATGTGCAGCAACAAGCCTTCTAGTATGGACATGTCTTGATGTTATCTTCTTTGGCAAACCATCTGTCATAGGTGCTATTCAGGGCATGATGACTGGACTCGTTTGCATTACTCCTGGAGCAGGGGTTGTGCAATCGTGGGCGGCTATTGTAATGGGAATACTATCTGGGAGTATTCCTTGGGTGTCAATGATGGTGTTGCACAAAAAGTCTAGCCTACTACAGAAGGTAGATGATGCCCTAGGTGTCTTTCACACCCACGCTGTAGCTGGTTTATTAGGTGGTCTCCTAACTGGGCTTCTAGCGGAACCATCACTATGCAGAATCCTACTCCCGGTGACCAATTCGAGGGGTGCATTTTACGGGGGTAGTGGTGGAATGCAATTCTTGAAGCAGTTGGTGGCAGCATTGTTTGTGATAGGATGGAACTTGGTATCCACCACATTAATTCTTCTAGCCATAAGGCTGTTCATTCCATTAAGAATGCCTGAAGAGCAGTTGATGATTGGAGATGATGCTGTCCACGGTGAGGAAGCCTATGCCCTTTGGGGTGATGGAGAAAAGTATGATCCAACTAAGCATGGATGGCATTCATCTTCATACGCAGAGGAAATCTCACCATCACCTTATGTCAATGGCGCAAGAGGGCTCACCATCAGTTTATGA 1470 0.4701 MATSEAYIAHLPGVPPWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLLCYRMAFGDKLLPFWGKGAPALGQKYLIQQAQVPESTQFYSNGTVETPRDDPLFPMASLVYFQFNFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASIAASMAVLNTNICAATSLLVWTCLDVIFFGKPSVIGAIQGMMTGLVCITPGAGVVQSWAAIVMGILSGSIPWVSMMVLHKKSSLLQKVDDALGVFHTHAVAGLLGGLLTGLLAEPSLCRILLPVTNSRGAFYGGSGGMQFLKQLVAALFVIGWNLVSTTLILLAIRLFIPLRMPEEQLMIGDDAVHGEEAYALWGDGEKYDPTKHGWHSSSYAEEISPSPYVNGARGLTISL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02466 489 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte3g02466 489 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pte3g02466 489 Gene3D Ammonium transporter AmtB like domains 8 451 IPR029020 -
Pte3g02466 489 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte3g02466 489 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Pte3g02466 489 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Pte3g02466 489 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005886
Pte3g02466 489 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Pte3g02466 489 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Pte3g02466 489 FunFam Ammonium transporter 6 451 - -
Pte3g02466 489 SUPERFAMILY Ammonium transporter 17 430 - -
Pte3g02466 489 PANTHER AMMONIUM TRANSPORTER MEP2 13 459 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02466 Pte-Chr3 45248279 45250718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02466 130 490 Inorganic Solute Cotransporters AT2G38290 76.454 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02466 K03320 - qsa:O6P43_016565 865.529