Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02449 ATGGAGGGATCACATGGAAGACTTCCTCGTCAACAATTTCAGCAGCATCAGCAGCAATATCAACATAGCGCAAGTATCAACGTCGATGTGAGTGATAGATTTCCCCAATGGAGTATTCAAGAAACCAAGGAGTTCTTGGCCATAAGAGAAGAGCTGGATCAAACTTTTATGGAGACAAAGCGGAACAAGCTTCTCTGGGAAGTCTTAGCCACAAAAATGAAGGAAAAGGGTTACAATCGAAGTGCAGAACAATGCAAGTGCAAGTGGAAAAATCTCGTTACACGCTATAAGGGATGTGAAATGATGGAGACAGACACCATGAGACAGCAATTCCCTTTCTACAACGAGCTACAAGCGATTTTTGCTGGTAGGATACAAAGAATGTTGTGGGCGGAAGCAGAAGGAGGTGGAGCCAGCGGGTCAAAGAATAAGGCCGCAGTGCAGTTATCATCTGAAGAAGAAGATTACAATGAAGATAGTGAAGGAGAGAAGGGTACTAGCATGAATAGGAAGAAGAAAAAGAGCAAAAGCAGTAGTATCAATGTCGGTAGCGGAAGTGGTAGCAATAATTTGAAAGAGATATTGGAAGAGTTCATGAAACAACAAATGGAAATGGAAGCAAAGTGGATGGAAGCTTTTGAAGCAAGAGAGAATGAGAGGAGAATGAAGGAGATGGAGTGGAGGAAGACCATGGAGGCATTAGAGAACGAGAAGATAATGATGGAACAGAGGTGGAGGGAGAGAGAAGAGCAAAGAAGAATGAGAGAAGAAGCTAGGGCTGAGAAAAGAGATGCTCTAATCACCGCTCTGTTGAACAAGCTCAGAAGAGGTGACATGTAG 840 0.4333 MEGSHGRLPRQQFQQHQQQYQHSASINVDVSDRFPQWSIQETKEFLAIREELDQTFMETKRNKLLWEVLATKMKEKGYNRSAEQCKCKWKNLVTRYKGCEMMETDTMRQQFPFYNELQAIFAGRIQRMLWAEAEGGGASGSKNKAAVQLSSEEEDYNEDSEGEKGTSMNRKKKKSKSSSINVGSGSGSNNLKEILEEFMKQQMEMEAKWMEAFEARENERRMKEMEWRKTMEALENEKIMMEQRWREREEQRRMREEARAEKRDALITALLNKLRRGDM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02449 279 Coils Coil 188 208 - -
Pte3g02449 279 Pfam Myb/SANT-like DNA-binding domain 36 120 IPR044822 -
Pte3g02449 279 PANTHER FI21293P1 21 275 - -
Pte3g02449 279 MobiDBLite consensus disorder prediction 134 188 - -
Pte3g02449 279 FunFam Zinc finger and SCAN domain-containing 20 37 98 - -
Pte3g02449 279 CDD GT1 35 100 - -
Pte3g02449 279 Gene3D - 37 98 - -
Pte3g02449 279 ProSiteProfiles Myb-like domain profile. 37 93 IPR001005 -
Pte3g02449 279 Coils Coil 224 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02449 Pte-Chr3 44967263 44968766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02449 32 276 Trihelix Transcription Factor Family AT5G01380 54.851 1.96e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte3g02449 Myb_DNA-bind_4 6.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02449 - - jre:108994851 351.673