Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02436 ATGGGGTCTCACCAAGAACCGTGGCTTTTGGAAAACGGAAACATCAAAGGTTTAAGCAGAGAAATGAGACATGGTCGGACGGCACACAACATGTCAGCTGCATCGTTAAGAAAGAAATCTGACCTCACTCTTGTATCAAAAGTTCCATTTAGCTTGCTCAGAAATGTGTTGGCCAATCTTCAAGAGGTTATACTGGGGACTAAGCTTTCAGTTCTGTTCCCTGCTATACCTTTGGCAATCGTTGCTCAGTGTTTAGGATTTGCTCGGCCATGGATCTTTGCTCTGAGCTTGCTTGGCCTTACTCCACTTGCTGAACGTGTCAGCTTCTTGACAGAGCAGATTGCCTTTTACACTGGTCCAACAGTTGGAGGGCTCGTAAATGCAACTTGTGGAAATATTACTGAACTCATCATAGCCATATTTGCTCTGAACCAAAACAAAGTAGACGTGGTCAAGTATTCTCTCTTAGGCTCTGTTCTTTCGAACCTTCTTCTTGTTCTTGGAACCTCTCTGCTTTGTGGTGGCTTGTCAAATCTCAGAACTGAGCAGAAATACGACAGAAGACAAGCCGATGTCAACTCACTTATGTTGATGCTTGCATTGCTGTGCCTCTTGTTGCCAATGCTCTATAGATATGCAGGCAACTCGGTTGCTTTAACAGCAGAACCAGTTTTACAATTGTCAAGGGTCACAAGCATAGTCATGCTGATTGCATACTTCTGCTTCCTCGCCTTTCAATTGCTTACACACAGAGAATTATTCGAAGCCCAAGAGGAAAGAGAAAATGATGACGATGCTGTAGAAGAAACAGCTGTACTTGGAGTCTGGAGTGCCCTGGCTTGGCTGGCCGGGATGACTGTATTTATAGCTTTGTTATCTGAATATGTGGTAGAGACAATTGAGGATGCATCAAAATCTTGGAGCCTCTCTGTCAGCTTCATCAGTATAATTTTGTTACCTATTGTTGGAAATGCAGCTGAGCACGCAGGAGCCATCATTTTTGCTGTCAAGAACAAATTGGACATCTCACTGGGTGTTGCTTTGGGTTCTGCCACTCAAATATCAATGTTCGCGATTCCTCTCTGCGTGATTGTTGCTTGGGGCATGGGCGTTAAGATGGACCTTAACTTCAATCTTCTAGAGACAGGCAGTCTTACATTGTCAATAATTGTCACAGCCTTAACTTTACAGGATGGCACTTCTCATTACATGAAAGGCCTTATTCTGATGCTGTGCTACATTGTTATTGGAGCTTGCTTCTTCTTAGTGAGAACACCTTTCAAGCAACCGAACCCCACTGATGTCACACTTCAGTTGGTGAGCAATGCAGTTTTTAGAGCATAA 1344 0.4368 MGSHQEPWLLENGNIKGLSREMRHGRTAHNMSAASLRKKSDLTLVSKVPFSLLRNVLANLQEVILGTKLSVLFPAIPLAIVAQCLGFARPWIFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLVNATCGNITELIIAIFALNQNKVDVVKYSLLGSVLSNLLLVLGTSLLCGGLSNLRTEQKYDRRQADVNSLMLMLALLCLLLPMLYRYAGNSVALTAEPVLQLSRVTSIVMLIAYFCFLAFQLLTHRELFEAQEERENDDDAVEETAVLGVWSALAWLAGMTVFIALLSEYVVETIEDASKSWSLSVSFISIILLPIVGNAAEHAGAIIFAVKNKLDISLGVALGSATQISMFAIPLCVIVAWGMGVKMDLNFNLLETGSLTLSIIVTALTLQDGTSHYMKGLILMLCYIVIGACFFLVRTPFKQPNPTDVTLQLVSNAVFRA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02436 447 Gene3D - 268 421 IPR044880 -
Pte3g02436 447 Gene3D - 120 267 IPR044880 -
Pte3g02436 447 NCBIfam calcium/proton exchanger 55 421 - -
Pte3g02436 447 Pfam Sodium/calcium exchanger protein 91 247 IPR004837 GO:0016020|GO:0055085
Pte3g02436 447 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016020|GO:0055085
Pte3g02436 447 NCBIfam calcium/proton exchanger 74 421 IPR004798 GO:0006816|GO:0015369
Pte3g02436 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pte3g02436 447 FunFam Vacuolar cation/proton exchanger 266 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02436 Pte-Chr3 44807122 44810047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02436 6 426 Antiporters AT2G38170 68.372 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02436 K07300 - gmx:100816231 620.542