Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02426 ATGATTTGCAGTTGCTTTCTCTCAATGAATTGTTGCAGGAGAAGGAAAGATTCTTCTGACACTTGGAAGATAGATGCACAGTGTCCTGCAACAGACAATCTTAAGCTGTTTTCTTATAATTCTCTGAGATCAGCAACAGATGATTTCCATCCATCACTGAGAATAGGTGGAGGAGGTTATGGAATTGTTCATAAGGGAGTCTTAAGAAACGGCTCTGAAGTTGCCATAAAGTCTCTTTCTGTGGGATCTTCACAAGGAACAAAAGAATTCATGACAGAAATCAGTATGATATCCACCATAAGACATCCAAACCTTCTGCAACTAATCGGCTGTTGTGTTGAGGGAAATAGAAGAATCTTGGTCTATGAACTTTTAGAGAATAACAGCCTTGCAAGCACTTTGCTTGGTTCCAAAAGTAGACATGTTTCTTTGAACTGGTCAACAAGGGCTGCTATTTGCTTGGGCACTGCTTCTGGTCTTGCATACCTTCACGAAGAGGCTGAACCAAACATTGTGCATAGAGACATAAAGGCCAGCAACGTCCTTCTTGATCGAAATTTTAATCCGAAAATTGGGGACTTCGGAATGGCAAAACTTTTTCCTGATAATGTCACTCATGTTAGCACTCGGGTTGCTGGAACTGTCGGATATCTTGCACCAGAATATGCACTTTTGGGACAGCTGACAAAAAAGGCAGATGTATATAGTTTTGGAATTCTCATACTTGAAATAATTAGTGGCCGAAGCAGTAGCAAAGCTGCATTTGGAGATGAACTAATGGTTCTGGTGGAATGGACATGGAAATTGAAAGAAGAAGATAGGCTTCTGGAGATTGTCGATCCAGAACTGGACGAATATGATGCAAAACAAGTTGTACGCTTCATTAAGGTTGCTCTTTTCTGCACACAAGCAGCTGCACGACTGAGGCCTAACATGAAGCAAGTTGTGCACATGCTCTCTAAGGAAGTGAACCTAAACGATAAAGCTCTGATGAAGCCCGGAGTTTTTAGGTGGCATAGCTCTAAAAAGTTAGACAGTGCTTCTGCAGAAGATTGTATTTCATCTACCTTGGAAGACAAGACCAAGCAATCTTCAAATCCTTCAGTAACCTCTACCAGCTTTGGTGGAGCTTACACTATCACGGACATGTTAAAGGCCTGTAAATATCCTTCACCAAAGATTAGCAACCTTACAATTATTGAGATTTTAGAGTGTAGAAAGAGAAAAGCACAGTGCACACCAATGACCGCCACGAAACATCGAGATAGCTCAATACCAGTGAGAAGTGAGGTCAAAATGGAGTTTCATGACAGACTCCTATGGCTATGTTCACGACAACTCAACGATGCTGGGTTGATTTCATCCATGCCGAACATAAATGAAACAGAGAACACAAAGATGAGCCGTTTAGGGTTTAAATCTGTGGTGTTCCATGGAGACCTGCCTTTAGGTGAACTGGATGTCATTCAAGTGACGTCGCACTCGAATTTCCAGTTCCCAAACAACGAGATTCGAATTCATTACTTGTCAACACCAAGTGAAAGATGTATTCCTCTCTCAATACTACAAACCATTTCTCCACACTCAGTTCGTTGCAAGCTCGAATCTTCATTCCCTCTTGAACAAACGAGTTTGATCGCCCTCCATGCCTCTTGCTATCATCAACTTCAGACGGCGGTGGTACTGTTAGGGGATGAAGAAATTCACTTGGTGGCAATGCCGAGTAAGCTGAAGAAATTTCCTTGTTTTTGGTGTTTTTCTGCTCCCGTGGGATTATATGAATCGTGCTTAGCAATGTTGAATTTGAGATGTCTTGCAATTGTGTTTGATCTTGATGAGACACTTATCGTTGCCAATACTATGAAGTCGTTTGAAGATAGGATTGAAACACTTCGAGGTTGGCTTGCCCGCGAGACTGATCCTGTGAGAGTAGCTGGAATGACAGCTGAAATGAAGCGATATATTGATGACAGAATGTTGTTGAAGCAGTACACTGAGAGTGATTTTGTTGTCGACAATGGAAAGATCTACAAGGTTCAAATGGAGGAGGTCCCTCCATTTTCTGATAACCATGAGAAATTTGTTCGGCCTGTTATTAGATTGCAAGAAAAGAACATAGTCCTTACTCGCATCAATCCGGAGATTCGTGATACCAGTGTTCTTGTGAGGCTCCGGCCTGCTTGGGAAGAATTGAGAAGTTATTTAACTGCAAAAGGACGCAAGCGATTTGAGGTTTATGTCTGCACTATGGCTGAAAGGGATTATGCCTTGGAAATTTGGAGGCTTCTTGATCCTGATTCACACCTCATTGCTTCCAAGCAAATACTTGATCGTGTAGTTTGTGTCAAATCAGGCTGTAGAAAGTCTTTGTTTACTGTCTTCCAAAGAGGTACATGCCATCCAAGGTTAGCAATGGTCATTGATGATCGCTGCAAAGTTTGGGAAGACAAGGACCAGCCTCGAGTTCATGTTGTTCCTGCTTTCACTCCTTACTATGCTCCTCAAGCAGAGACAGCTAATGCTGTTCCAGTCCTTTGTGTGGCAAGGAATGTTGCATGCAGTGCAAGGGGTACCTTTTTCAAAGATTTTGATGAGGTTTTGCTACGGAAAATCTCTGAAATCTTTTATGAAGATGATGTGTTACTTCTACCACCTCCTCCAGATGTGAGCAAAGTTTTGATACCAGAGTTTCATGAACGCCAGGATGCTGGTTCTGTACTAAATGGTATTGGTACTGCTCCCATCAGTGAAGGAATGGAAGGCACTGAAGTTGAAAGAAACATGAATCAATCTGATGAGAAAACTGCTTCTTCAGTTCCTTCTGCCACAATGGCTTTTGAGTTGAGATCAGAAATAAAACGGCCTCTAGCTGTTGTTTCCAATAGTAGTGGACTTGGATCTTCAAGAACGACTTTGTCATCACAAAAAGTCAGTTTGCTTGGTCCTCCATTAAGAAGAGATGGCTGCACTGCTGATCAGGGTTATGAGGGAATGAAAGGACTCCTTACAGTGAACCAAGGTCAAGATACGAGAAACCTAAGCTCAAGTGAACCTCCTATTCTTTCCAGGCTACCTGGACAAACACCAGTATCCTCACAGTTAGAGTGTGGCTGGTTGGTGGAGGATGACTCAAGTAGAGGGAAAATGAATCATCGACTTTTGGGCTGTATTGAAGCACCCAATGGATTGAAACTTGATGAACAACAAGGCCAAGCTAATCCATTTTGTCTTAGTAATGCTTCCCAGGTGAAGAAGGACAAAGAGGCAACCGTTGTAAATGATTTGCAAAGGCAAAATCTTTCGTTTTCAAATAAGTTAACAGATTCCGTTGCACTTCAGAGGCAAACTTCTTTGAATGATAGAGATATTCAAAAAGAAGCTGTAAAAACAAACTTCCTCCCTTCTAGTTTATCAATTGGAGTTCTGCAAGAAATTGGTAGGAGGTGCAGTTCAAAGGTTGAGTTCAAGTCCATAGTAAGCACCAGTGAAGATTTACAATTTTCTGTTGAGGTATTATTCACTGGTGAAAAGATTGGTATTGGAATGGGTCGGACAAGAAAGGATGCTCAACAACAGGCAGCTGAGAATGCCCTTCGCAGCTTGGCAGAAAAATATGTTGCGTATATGGAGCCGTATGGTGAAGCCTTGGAAAAGGGTTTTGGTAGATCTTCTCGAGGAAATGAAAATGGCTTCTTATGGGATGTTGATACTGGTCCGAGTGAACTTCAAATAGTTGATGGTTTGCCCAAACGAAATGCATCTGAGGTTTCCGATGTTGAAATTGGGGTCCCTTCTTCTGATTCTATTATGAGAGCACAGAAGCGAGCTTCCTCATTATTGCAGCAGCCTGCTTCTTGGAAAAAACTGAAAGAAGTGTGA 3879 0.4197 MICSCFLSMNCCRRRKDSSDTWKIDAQCPATDNLKLFSYNSLRSATDDFHPSLRIGGGGYGIVHKGVLRNGSEVAIKSLSVGSSQGTKEFMTEISMISTIRHPNLLQLIGCCVEGNRRILVYELLENNSLASTLLGSKSRHVSLNWSTRAAICLGTASGLAYLHEEAEPNIVHRDIKASNVLLDRNFNPKIGDFGMAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILILEIISGRSSSKAAFGDELMVLVEWTWKLKEEDRLLEIVDPELDEYDAKQVVRFIKVALFCTQAAARLRPNMKQVVHMLSKEVNLNDKALMKPGVFRWHSSKKLDSASAEDCISSTLEDKTKQSSNPSVTSTSFGGAYTITDMLKACKYPSPKISNLTIIEILECRKRKAQCTPMTATKHRDSSIPVRSEVKMEFHDRLLWLCSRQLNDAGLISSMPNINETENTKMSRLGFKSVVFHGDLPLGELDVIQVTSHSNFQFPNNEIRIHYLSTPSERCIPLSILQTISPHSVRCKLESSFPLEQTSLIALHASCYHQLQTAVVLLGDEEIHLVAMPSKLKKFPCFWCFSAPVGLYESCLAMLNLRCLAIVFDLDETLIVANTMKSFEDRIETLRGWLARETDPVRVAGMTAEMKRYIDDRMLLKQYTESDFVVDNGKIYKVQMEEVPPFSDNHEKFVRPVIRLQEKNIVLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEIWRLLDPDSHLIASKQILDRVVCVKSGCRKSLFTVFQRGTCHPRLAMVIDDRCKVWEDKDQPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACSARGTFFKDFDEVLLRKISEIFYEDDVLLLPPPPDVSKVLIPEFHERQDAGSVLNGIGTAPISEGMEGTEVERNMNQSDEKTASSVPSATMAFELRSEIKRPLAVVSNSSGLGSSRTTLSSQKVSLLGPPLRRDGCTADQGYEGMKGLLTVNQGQDTRNLSSSEPPILSRLPGQTPVSSQLECGWLVEDDSSRGKMNHRLLGCIEAPNGLKLDEQQGQANPFCLSNASQVKKDKEATVVNDLQRQNLSFSNKLTDSVALQRQTSLNDRDIQKEAVKTNFLPSSLSIGVLQEIGRRCSSKVEFKSIVSTSEDLQFSVEVLFTGEKIGIGMGRTRKDAQQQAAENALRSLAEKYVAYMEPYGEALEKGFGRSSRGNENGFLWDVDTGPSELQIVDGLPKRNASEVSDVEIGVPSSDSIMRAQKRASSLLQQPASWKKLKEV* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02426 1292 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 24 124 - -
Pte3g02426 1292 SMART forpap2 659 835 IPR004274 -
Pte3g02426 1292 Pfam Protein tyrosine and serine/threonine kinase 54 319 IPR001245 GO:0004672|GO:0006468
Pte3g02426 1292 ProSiteProfiles Protein kinase domain profile. 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02426 1292 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 331 - -
Pte3g02426 1292 SUPERFAMILY dsRNA-binding domain-like 1139 1202 - -
Pte3g02426 1292 CDD DSRM_RNAse_III_family 1142 1201 - -
Pte3g02426 1292 SUPERFAMILY Protein kinase-like (PK-like) 27 319 IPR011009 -
Pte3g02426 1292 Pfam Double-stranded RNA binding motif 1141 1201 IPR014720 -
Pte3g02426 1292 SMART DRBM_3 1138 1202 IPR014720 -
Pte3g02426 1292 FunFam RNA polymerase II C-terminal domain phosphatase-like 1 669 856 - -
Pte3g02426 1292 MobiDBLite consensus disorder prediction 1008 1028 - -
Pte3g02426 1292 FunFam RNA polymerase II C-terminal domain phosphatase-like 2 1134 1208 - -
Pte3g02426 1292 SMART serkin_6 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02426 1292 SUPERFAMILY HAD-like 594 846 IPR036412 -
Pte3g02426 1292 Gene3D Transferase(Phosphotransferase) domain 1 125 333 - -
Pte3g02426 1292 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Pte3g02426 1292 Pfam NLI interacting factor-like phosphatase 716 826 IPR004274 -
Pte3g02426 1292 Gene3D - 1135 1207 - -
Pte3g02426 1292 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 355 - -
Pte3g02426 1292 CDD STKc_IRAK 55 321 - -
Pte3g02426 1292 Gene3D - 594 867 IPR023214 -
Pte3g02426 1292 ProSiteProfiles FCP1 homology domain profile. 600 848 IPR004274 -
Pte3g02426 1292 Gene3D Phosphorylase Kinase; domain 1 21 124 - -
Pte3g02426 1292 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1137 1203 IPR014720 -
Pte3g02426 1292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02426 Pte-Chr3 44644013 44669985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02426 13 378 Receptor kinase-like Gene Family AT1G56120 48.378 1.73e-99 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte3g02426 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02426 K18998 - qsa:O6P43_026212 1022.31