Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02409 ATGGAGGGTATACTTATTTGTGCAGCCCCTCATTGTCTTAAATCTTTCTTGAAACGGGCTGATTTTGAATCTCATATCCAAGACAGACATGCTAACCTCCTCCGGCCCAATGTGGAGAAAGAAGATGGAAATGATTCAGAGGTACAGAGTGTCAGACAGTCTGCAGCTTCAGAATCCACCATCCGAGGTCCCCAGGGGCAGGTGTTTTCCCCTGGTCCAAATAGCCTGCTTCATGAGCCTGACGACAAGTTGCATCGCCAGCAATCTAGAGATCAACAACATTTAAGAGCATCCGTACAACCAAGGCCTCCCATAGCACTGCAAATGCCAAATCACCCATCGGATCCACAAGCTGGACCTCTGACAGGAAGCCAACATGCCTTTCATCAACAAAATTTTGACATGCAGGGTACTCCTCAACATTCCAATCAATTTCCAGACAGGCAGCAAGCAGTTGTGCCTGCAATGCAGTTCCCTGATTATCCACCCATGCATTCCGTACAGCCATCTAACTATGCTGTGCCTGTTAATGCAAACACAATGATGAACCCTCCTCTGCCATTTGGTTACCCTCCTTATCCTCCTGAAGGTGCTCAACCATATTTTGCTCCTCCATTTGAGATTGCTCGACAAGACTCCGGTTCTGAAGTAGTTGCAGAGCAGGGACCACCAATGGGTTTCCCACCAGGTTATGCTCCACATCAGCAGTGGAAGGGCGGAATGGATGGTGCGCCTTTCTTTGAACAAGTGATTGTTGGTCAAGCCCGAAGTGTCAATGCCATGGATGTACGTGATGCCAAAGGTATATTGGCACCGCAACCATTCCCGCTCCCTCCTCCACCTCCTCCTCCACGCCACAAGTTCTACTCTGGTGATCTTTCACATGATGGACGACATAATATATGGCAGGCTGATAGCCATGGTGGTTATGGGGATCGCCAAGACTAG 948 0.4884 MEGILICAAPHCLKSFLKRADFESHIQDRHANLLRPNVEKEDGNDSEVQSVRQSAASESTIRGPQGQVFSPGPNSLLHEPDDKLHRQQSRDQQHLRASVQPRPPIALQMPNHPSDPQAGPLTGSQHAFHQQNFDMQGTPQHSNQFPDRQQAVVPAMQFPDYPPMHSVQPSNYAVPVNANTMMNPPLPFGYPPYPPEGAQPYFAPPFEIARQDSGSEVVAEQGPPMGFPPGYAPHQQWKGGMDGAPFFEQVIVGQARSVNAMDVRDAKGILAPQPFPLPPPPPPPRHKFYSGDLSHDGRHNIWQADSHGGYGDRQD* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02409 315 MobiDBLite consensus disorder prediction 48 72 - -
Pte3g02409 315 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 299 IPR040383 GO:0016567|GO:0061630
Pte3g02409 315 MobiDBLite consensus disorder prediction 33 47 - -
Pte3g02409 315 MobiDBLite consensus disorder prediction 273 315 - -
Pte3g02409 315 MobiDBLite consensus disorder prediction 33 124 - -
Pte3g02409 315 ProSitePatterns Zinc finger C2H2 type domain signature. 7 30 IPR013087 -
Pte3g02409 315 MobiDBLite consensus disorder prediction 78 92 - -
Pte3g02409 315 MobiDBLite consensus disorder prediction 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02409 Pte-Chr3 44236155 44237102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02409 1 229 C2H2 Transcription Factor Family AT5G01160 37.083 2.49e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02409 K15685 - gmx:100817582 330.102