Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02408 ATGCTTCAGATTCGGCTTAGTAAAGCTCCAGCCTTTGAAGGTTCTGGACCAGTAAAGGCTTTACCAGCTGAGACTGTGACAGTTGCATGCCCTGATCATCTTGTGCTTGCTGATCTTCCTGTTGCAAAGGGCATTGGTGCAGCAACTGCTGCTTCTCTTGTCAAAACTGTGGGACGGAGATCCCGCCGCCAACTTGGAGAACGAGTCCATTTTTGTGTGCGATGTGATTTCCCTATTGCTATCTACGGACGACTGGTACCATGGCATCCTTTTTCTGTTTTTCTTTTATTAAGTCTCAGGTTGCTAAAATTTTCTTTTTTGGCAATTTGA 330 0.4515 MLQIRLSKAPAFEGSGPVKALPAETVTVACPDHLVLADLPVAKGIGAATAASLVKTVGRRSRRQLGERVHFCVRCDFPIAIYGRLVPWHPFSVFLLLSLRLLKFSFLAI* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02408 109 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 91 IPR013083 -
Pte3g02408 109 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 87 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02408 Pte-Chr3 44235277 44235606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02408 1 87 C2H2 Transcription Factor Family AT5G01160 72.414 2.08e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02408 K15685 - lja:Lj3g3v1403940.1 157.532