Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02398 ATGTCTCACAGCCATGACAGTGGTCAAGGTGACATGCCCATGCCCATGCCCATGCCCAACGGGGGTGGTATGGACATGAACAACTCAAATGGCTACAGCATGATGATGATGCATATGAGCTTCTATTGGGGGAAAGATGCCATAGTGCTTTTCCCTGGGTGGCCTAAACAAAGCATTGGTATGTACATATTAGCCATCTTCTTTGTCTTCTTCATAGCAATAGCCACAGAAGTTCTCTCCATCCTCACCTTGGCTGTCAGAAGTGGCAAGAATCCATTTCTGTTGGGACTGACTCAATCCATCGTCTTTGCCTTTCGCATAGCTCTTGCTTACTTGGTTATGCTCTCAGTCATGTCCTTCAATGTTGGAATCTTCATAGCCGCAGTTCTTGGCCATACAACTGGGTTTTTCATTGTCAAAGTTCGAGCTCTTTCCAAGGCCAACAAGAAAGCTGAGACGGAGGATTCTTTAGCCAATGGTTCTTCTAAAGTTTGA 495 0.4566 MSHSHDSGQGDMPMPMPMPNGGGMDMNNSNGYSMMMMHMSFYWGKDAIVLFPGWPKQSIGMYILAIFFVFFIAIATEVLSILTLAVRSGKNPFLLGLTQSIVFAFRIALAYLVMLSVMSFNVGIFIAAVLGHTTGFFIVKVRALSKANKKAETEDSLANGSSKV* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02398 164 Pfam Ctr copper transporter family 39 84 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pte3g02398 164 Pfam Ctr copper transporter family 97 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pte3g02398 164 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 28 149 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02398 Pte-Chr3 44060316 44061185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02398 18 154 Inorganic Solute Cotransporters AT5G59030 43.571 5.75e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02398 K14686 - qsa:O6P43_026446 161.384