Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02391 ATGGAAGCCACGGAAAAGGGTGCGAATACTGACCCCACCTACCATGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCTGAGATCCGTGAGCCAGGGAAGGGGATGGTTAGGATTGGAAGTTACCAAGCACCCGAAATGGCGGCGACAGCTTATTTCGTAGCAGCTTTGCACCTTAAAGGGAGCTCTGCACGCCTCAACTTTCCCGAGCTGGTCGGAAGTTTCCCACGTCCTCTAAGTTCAAGGGCCGAGGATGTGCAGTGGGCAGCTCAAGAGGCAGCATTGAGGTTTAAGAGACTGGTGGATGTGGCTTCAGAGAATTGGACCGTGCCAGCGACAGTGGAGTTGTCACCTTGCTAG 360 0.5417 MEATEKGANTDPTYHGVRKRKWGKWVSEIREPGKGMVRIGSYQAPEMAATAYFVAALHLKGSSARLNFPELVGSFPRPLSSRAEDVQWAAQEAALRFKRLVDVASENWTVPATVELSPC* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02391 119 ProSiteProfiles AP2/ERF domain profile. 13 69 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 PRINTS Ethylene responsive element binding protein signature 51 71 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 95 - -
Pte3g02391 119 Pfam AP2 domain 13 61 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Pte3g02391 119 CDD AP2 14 71 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 SMART rav1_2 13 75 IPR001471 GO:0003700|GO:0006355
Pte3g02391 119 SUPERFAMILY DNA-binding domain 13 70 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02391 Pte-Chr3 43966223 43966884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02391 2 118 AP2-EREBP Transcription Factor Family AT1G71450 49.600 7.36e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte3g02391 AP2 3.6e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02391 - - qsu:111995063 143.665