Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02354 ATGAATGACTTTGCGGAGCCTAGATCACTTGCTCCCACTGGACTGTATCTTGGTGGCACAAAATATATGGTGATCCAAGGAGAGCCAGGAGCTGTTATTCGAGGGAAGAAGGGTCCTGGGGGTGTTACGGTCAAGAAGACCAATATGGCCCCAGTCATTGGGATCTATGATGAACCAATGACCCCTGGCCAGTGCAACATGATAGTTGAAAGGCTCGGTGATTATCTCATTGATCAGGGTCTCTAG 246 0.4878 MNDFAEPRSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNMAPVIGIYDEPMTPGQCNMIVERLGDYLIDQGL* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02354 81 PRINTS Profilin signature 63 80 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Profilin signature 50 63 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Profilin signature 14 28 IPR005455 GO:0003779
Pte3g02354 81 CDD PROF 1 80 IPR005455 GO:0003779
Pte3g02354 81 Pfam Profilin 3 80 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Plant profilin signature 21 30 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Plant profilin signature 67 80 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Plant profilin signature 54 67 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Plant profilin signature 2 16 IPR005455 GO:0003779
Pte3g02354 81 PRINTS Plant profilin signature 34 49 IPR005455 GO:0003779
Pte3g02354 81 SMART prof_2 1 81 IPR005455 GO:0003779
Pte3g02354 81 SUPERFAMILY Profilin (actin-binding protein) 2 80 IPR036140 -
Pte3g02354 81 PANTHER PROFILIN 1 80 IPR005455 GO:0003779
Pte3g02354 81 Gene3D Dynein light chain 2a, cytoplasmic 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02354 Pte-Chr3 42954170 42954910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02354 1 82 Cytoskeleton Gene Families AT4G29340 74.390 3.89e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02354 K05759 - tcc:18588488 155.992