Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02340 ATGGCCTCACCATCCAATTCTCTTTCATTCACAGTTCGGAGGCAGAAACCGGAGTTAATAGCTCCGGCTATTCCTACTCCACGAGAGCTTAAACAACTATCTGACATTGATGACCAAGAAGGTCTACGTTTCCAAGTCCCAGGGATACAGTTTTACCGTAATAATCCTTGCATGCAAGGGAAAGACCCTGCAGATTCCATTAGGAAAGCACTGTCAAAAGCTTTGGTTTTCTACTACCCTTTTGCTGGTAGGCTTAGTGAAGGAGCAAATAAGAAGCTCATGGTGGATTGCACAGGTGAAGGTGTGCTGTTCATTGAGGCTGATGCTGATGTTAGTCTTGAACAATTTGGTGATGCTCCTCAACCTCCATTTCCTCTATTGGAAGAGCTACTCTTTGAAGTTCCTGGCTATGGCGAGGTTCTTCACTGTCCTGTGTTGCTAATACAGGTGACTCGTCTCAAATGTGGTGGGTTCATCTTTGCCATTCGTGTAAACCATGCAATAACTGATGCAGTAGGCACAGTTCAATTCATGAATGCAATAGGAGAAATCGCAAGAGGTGCTGAGATACCATCCATTCAACCAGTATGGTGTAGAGAGCTATTGAATGCAAGATTTCCACCTCGTGTCACATGCATACACCACGAATACGATAGAGTTGCTGACACGAAAGGAACCATTATACCACTTGATCAAATGGTTCATCGTTCTTTCTTCTTCGGTCCTACTGAGATATCAGCCGTTAGAAAATCCATTCCCAATCACTTAGCCAAATGCTCGACCTTTGAATTACTCGCTGCTTCCTTATGGCGATGTCGCACCATATCATTGCAGGCAGACCCTGAGGAACAGGTGCGTATGATATGCATTGTTAATGCTAGATCAAAGTTCAATCCTCCACTGCCACAAGGCTATTATGGCAATGGATTTGCATTTCCAGTTGCATTGTCGACAGCGAAGGAACTAAGTGAAAAACCATTAGGGTATGCACTTGAGTTAGTAAAGAAGGCAAAGGCTGATGTGACTGAAGAATACATGAGATCAACAGCTGATCTTATGGTGATGAAAGGAAGGCCTCACTTCGCGGTAGTGAGAACTTACCTTGTATCTGATGTAACTCGTGCTGGATTCGTTGATGTTGATTTTGGATGGGGTAAAGCAGCATATGGTGGACCAGCTAAAGGTGGTGTTGGTGCCATTCCTGGATTAGTAGCTCCGGCTATTCCTACTCCACGAGAACTTAAACAACTATCTGACATTGATGACCAAGAAGGTCTACGTTTCCAAATCCCAGGGATACAGTTTTATCGTAATAATCCTTGCATGCAAGGCAAAGACCCTGTAGATGCCATTAGGAAAGCACTGTCAAAAGCTCTGGTTTTCTACTACCCTTTTGCTGGTAGGCTTAGGGAAGGAGCCAATAAGAAGCTCATGGTGGATTGCACAGGTGAAGGTGTGCTGTTCATTGAGGCTGATGCTGATGTTAGCCTTGAACAATTTGGTGATGCTCCTCAACCTCCATTTCCTCTATTGGAAGAGCTACTCTTCGATGTTCCTGGCTCTGGTGAGGTTCTTCACTGTCCTGTGTTGCTAATACAGGTGACTCGTCTCCAATGTGGTGGGTTCATCGTCGCCATTCGTATAAACCATACGATGGCTGATGGAGTAGGCATAGCTCAATTCGTATGTGCAATAGGAGAAATCGCAAGAGGTGCTGAGAGACCATCCATTCAACCAGTATGGTGTAGAGAGCTATTGAATGCAAGATTTCCACCTCGTGTCACATGCACACATCACGAATACGATAGAGTTGCTGACACGAAAGCCACCATCATACCACCTGATCAAATGGTTCATCGTTCTTTCTTCTTCGGTCCTACTGAGATGTCAGCCATTAGAAAATCCATTCCCAATCACTTAGCCAAATGCTCGACCTTTGAATTACTCTCTGCTTCCTTATGGCGATGTCGCACCATAGCATTGCAGGCAGACCCTGAGGAACAGGTGCGTATGATATGCATTGTTAATGCTAGATCAAAGTTTAATCCTCCACTGCCACCAGGCTATTACGGCAATGGATTTGCATTTCCAGTTGCATTGTCGACGGCGAAGGAACTAAGTGAAAAACCATTAGGGTATGCACTTGAGTTAGTAAAGAAGGCAAAGGCTGAAGTGACTGAAGAATACATGAGATCAACAGCTGATCTTATGGTGATGAAAGGAAGGCCTCACTTCACGGTAGTGGGAACTTACCTTGTATCTGATGTAACTCGTGTTGGATATACTGATGGTGATTTTGGATGGGGTAAGGCAACATATAGTGGACCAGCTACAGGTGGTGTTGGTGCCATTACTGGAGTGGTTAGCTTTCTCATATCATTCAAGAATGGTAAGGGGGAGAATGGTATTGTTGTGCCTATTTGTCTACCGGCCTTGGCCATGGAAAGGTTTGTCGTGGAAATGGACAAATTATTGAAAGGTCAAAGTCATCCTTCTACTGGTGATCCATCTTCCAGTTTTATCGCTTCCAGCTTGTAA 2538 0.4448 MASPSNSLSFTVRRQKPELIAPAIPTPRELKQLSDIDDQEGLRFQVPGIQFYRNNPCMQGKDPADSIRKALSKALVFYYPFAGRLSEGANKKLMVDCTGEGVLFIEADADVSLEQFGDAPQPPFPLLEELLFEVPGYGEVLHCPVLLIQVTRLKCGGFIFAIRVNHAITDAVGTVQFMNAIGEIARGAEIPSIQPVWCRELLNARFPPRVTCIHHEYDRVADTKGTIIPLDQMVHRSFFFGPTEISAVRKSIPNHLAKCSTFELLAASLWRCRTISLQADPEEQVRMICIVNARSKFNPPLPQGYYGNGFAFPVALSTAKELSEKPLGYALELVKKAKADVTEEYMRSTADLMVMKGRPHFAVVRTYLVSDVTRAGFVDVDFGWGKAAYGGPAKGGVGAIPGLVAPAIPTPRELKQLSDIDDQEGLRFQIPGIQFYRNNPCMQGKDPVDAIRKALSKALVFYYPFAGRLREGANKKLMVDCTGEGVLFIEADADVSLEQFGDAPQPPFPLLEELLFDVPGSGEVLHCPVLLIQVTRLQCGGFIVAIRINHTMADGVGIAQFVCAIGEIARGAERPSIQPVWCRELLNARFPPRVTCTHHEYDRVADTKATIIPPDQMVHRSFFFGPTEMSAIRKSIPNHLAKCSTFELLSASLWRCRTIALQADPEEQVRMICIVNARSKFNPPLPPGYYGNGFAFPVALSTAKELSEKPLGYALELVKKAKAEVTEEYMRSTADLMVMKGRPHFTVVGTYLVSDVTRVGYTDGDFGWGKATYSGPATGGVGAITGVVSFLISFKNGKGENGIVVPICLPALAMERFVVEMDKLLKGQSHPSTGDPSSSFIASSL* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02340 845 Gene3D - 219 382 IPR023213 -
Pte3g02340 845 PANTHER ACYL TRANSFERASE 4 401 824 - -
Pte3g02340 845 Pfam Transferase family 12 393 - -
Pte3g02340 845 Pfam Transferase family 403 822 - -
Pte3g02340 845 Gene3D - 401 599 IPR023213 -
Pte3g02340 845 Gene3D - 11 218 IPR023213 -
Pte3g02340 845 Gene3D - 600 819 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02340 Pte-Chr3 42557635 42582737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02340 403 821 Monolignol Biosynthesis Gene Families AT5G48930 29.561 3.61e-48 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02340 K19861 - qsa:O6P43_030206 654.825