Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02328 ATGGCGAACTCTAGGCTTCGACCCCTCGTCTGGTGCAGAAAGTGGGCCAAGAAGGAATGGGCAATTGCTGCAATGGGTTCCACCATCGTTGTCTTGTTACTCGCTCACTTCTCTGACTCATGGACCAATGGGGAAGTCAACCACACCAAGGTCAAGCAAAGCGCATCCAATCTCTCCGAAGACTTCGATTTGGTCGAGTTGACATTGTTGCCTAATGCTAAGCAAAGAGGCGCTCTTTGCTTGGATGGAAGCGCACCTGGGTACCATTTCCAAAAGGGTTTTGGATCCGGGTCTCAACATTGGGTTCTTCACATTGAGGGAGGAGGCTGGTGCGATTCAGTATATTCATGTTCTCTGCGAAAAGGGTCTGCATTGGGTTCCTCAAAGTATATGGAAAAGCTAGTTCTTTTTTCTGGAATATTAAGCAGTAACCCGGCACAAAATCCTGATTTTTTTAACTGGAATAAGGTCAAGGTTCGATATTGTGATGGAGCGTCTTTTGCCGGTCACCCTGAAAATGATATTAAGAAAGGAACCCGACTATTTTTCAGAGGTCAACAAATCTGGGAAGCAGTTATGGATGAACTGTTGTCAATTGGTTTATCTGATGCAAAGCAGGCTCTTCTTTCAGGATGTTCTGCTGGAGGTTTAGCAACTCTTACACATTGTGATGATTTCCGGATGCTTCTTCCTCAAGATGCAAATGTCAAGTGTCTGGCAGATGCAGGTTTTTTCCTCAAGGAGAAAGATATTCAAGGCAATCCAACCATGAGAAATTTCTATCATGATGTTGTCCAGCTGCATGGTGTTGCAAAAAGTTTGAATAAGGAATGTGCTAATAGGATGGAACCATCCGAGTGTCTGTTTCCTGAAGAAATCATCAAAAAAATACAGACCCCTATATTCCTTGTGCAACCAGCATATGATTTCTGGCAGATTAAAAACATCTTGGTTCCAAATGGTTCTGATCCTCATCGCCACTGGGAAGTTTGCAGATTGAGCCTTCATAAATGTAATAAAGATCAGAATGATATACTACAAGGTTACCGCAGTTCCCTATTGAAGGCGACAAATGAGTTTCAGCTTCGGAAGGAATGGGGAATGTTTATAAATTCTTGCTTCATTCATTGCCAGACTTTGATTTCAGAAACATGGCACTCACCCAGTTCTCCTAGAATCAACAAGAAGACAATTGCTGAATCTGTTGGTGATTGGTTCTTCAATCGAGAAGTACCAAAACTATTGGACTGCCCTTCTTTTACATGCAACCCCACTTGCTATAATATGGATTTCACAAGCCAACTCTAG 1308 0.4274 MANSRLRPLVWCRKWAKKEWAIAAMGSTIVVLLLAHFSDSWTNGEVNHTKVKQSASNLSEDFDLVELTLLPNAKQRGALCLDGSAPGYHFQKGFGSGSQHWVLHIEGGGWCDSVYSCSLRKGSALGSSKYMEKLVLFSGILSSNPAQNPDFFNWNKVKVRYCDGASFAGHPENDIKKGTRLFFRGQQIWEAVMDELLSIGLSDAKQALLSGCSAGGLATLTHCDDFRMLLPQDANVKCLADAGFFLKEKDIQGNPTMRNFYHDVVQLHGVAKSLNKECANRMEPSECLFPEEIIKKIQTPIFLVQPAYDFWQIKNILVPNGSDPHRHWEVCRLSLHKCNKDQNDILQGYRSSLLKATNEFQLRKEWGMFINSCFIHCQTLISETWHSPSSPRINKKTIAESVGDWFFNREVPKLLDCPSFTCNPTCYNMDFTSQL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02328 435 PANTHER NOTUM-RELATED 35 429 IPR004963 GO:0016787
Pte3g02328 435 Pfam Pectinacetylesterase 62 410 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02328 Pte-Chr3 42371095 42375709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02328 1 397 Carbohydrate Esterase AT3G09410 57.179 2.28e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02328 K19882 - qsa:O6P43_026533 639.417