Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02317 ATGGTTTTCTCCTCCATTCCAGCTTATCTTGATCCAGCCAACTGGCAACAGCAACCGAATCATCCAACTGGTAGTAGTAGTGGAACAAGTTCTCAGCTTCCTCCACCAACGCCACCGCCGCCACCTCATCCTCCTCAACCGCAACCATCACTGCAGCCTCATGGAGCTGGTAGTTCAGGCTCGATTCGACCGGGGTCTATGGTGGATAGAGCTAGACTGGCTAGCATACCTATGCCTGAGGCTGCCCTAAAATGCCCAAGATGTGAATCTACAAACACCAAATTTTGTTACTTCAACAATTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGACCTGCCGAAGGTATTGGACTAGAGGAGGAGCCTTGAGAAACGTTCCAGTTGGAGGTGGCTGCCGACGAAACAAGCGAAGCAAAGCAAGCAGCTCGAAATCTCCTGTCAGTTCAGATCGCCAAACTGGCCGCACTGCTAGTTCTGGAAACTCAATTTCTTCAAATAGTGGCAGCACCGCTGAGATTCTTGGCCTTACATCATCTCAATTGGCACCCCTGAGATTTATGAATCCACTAAGTCATCAGCTAACTGACTTTGCAGCTGGAGACATGGGATTAAGTTATGGCCTAAGCTACAGTCCAGTTTCTGCTCCAATGGGAGGAATCAGTGACTTGAATTTTCAAATAGGAAATGCTTTTAGTGGAAATGGTAGCAGTGTTGGAGGTATCACTAGCTCTTTCCTATCTGCCTCTGGTTTGGAAAATTGGAAATTGCAGCAAACACAGCAGTATCCCCTCATGGCTGGTTTGGAAACTTCATCAGGACTATACTCTTTTGAAGGTGGTCCTGAAGGATATGCCGGTGTAGTAAGTCATGTAAGGCCAAAACCAACAAGCACTGCAGGATTGATATCTCAAATGGCCTCAGTAAAAATGGAGGAAAGTCATCAAGAAATGAATTTGTCAAGGCAACTGTTGGGGATGAACAATCAAGGAACGGATCATCAATATTGGACTGGTAGTACAAACGCAACATGGACTGATCTTTCTGCTAATTTTAGCTCTTCTTCTAATACCACTAGCAATCCCATATAA 1089 0.461 MVFSSIPAYLDPANWQQQPNHPTGSSSGTSSQLPPPTPPPPPHPPQPQPSLQPHGAGSSGSIRPGSMVDRARLASIPMPEAALKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKASSSKSPVSSDRQTGRTASSGNSISSNSGSTAEILGLTSSQLAPLRFMNPLSHQLTDFAAGDMGLSYGLSYSPVSAPMGGISDLNFQIGNAFSGNGSSVGGITSSFLSASGLENWKLQQTQQYPLMAGLETSSGLYSFEGGPEGYAGVVSHVRPKPTSTAGLISQMASVKMEESHQEMNLSRQLLGMNNQGTDHQYWTGSTNATWTDLSANFSSSSNTTSNPI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02317 362 MobiDBLite consensus disorder prediction 141 168 - -
Pte3g02317 362 ProSitePatterns Zinc finger Dof-type signature. 85 121 IPR003851 GO:0003677|GO:0006355
Pte3g02317 362 MobiDBLite consensus disorder prediction 1 65 - -
Pte3g02317 362 MobiDBLite consensus disorder prediction 127 168 - -
Pte3g02317 362 ProSiteProfiles Zinc finger Dof-type profile. 83 137 IPR003851 GO:0003677|GO:0006355
Pte3g02317 362 MobiDBLite consensus disorder prediction 32 51 - -
Pte3g02317 362 Pfam Dof domain, zinc finger 82 137 IPR003851 GO:0003677|GO:0006355
Pte3g02317 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 49 261 IPR045174 GO:0003700|GO:0006355
Pte3g02317 362 MobiDBLite consensus disorder prediction 10 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02317 Pte-Chr3 42289404 42291330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02317 1 278 C2C2-Dof Transcription Factor Family AT2G37590 46.026 5.07e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte3g02317 zf-Dof 2.2e-32 No_clan