Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02312 ATGGATGTCAAGGTTGAAGAGAAACCAAGAGATCTGCGTGCAATAGGGATAGAGAATTATCAACAAGGAAATATAGCTGCTGCTGAGTTTGAGGCTAGGAAAGAAGATGCTTTGGGGGTTGAGGTTGATAGACAGATTTGGCTTGAAAATGGAGACGACGGTTTACTTGGTGTAAATGATGCTTCAATGTTCTATGCTGACTTCCCTCCTCTTCCAGATTTCCCATGCATGTCATCATCTTCATCCTCATCATCCACACCAGTCCCAACTAAGGCCATGACCTGTTCATCAGCGGCCTCTACTGCATCTTCAGCTACTTCTGCTGTTTCTTGGGCAGTTCTGAAATCAGATGCAGAACAAGATGGCGACAAGAACAATACCAACACCGACAACTTTCATTGTCATTTTGGTCAGCATGAGAATCTTCTCGGACTACCACAAGGTTCATTATCTTCTACAGTTTCTATGGAAATTCCGCAACCGTCTGATCACAGTACTCGACAGTTAGATGTTGTTGATTGTGTGGATGTGATGGAGAATTTCGGATACATGGATCTCTTGGGGAACTATGAATTGTTTGATCCATCATCGATTTTACGAACTGATAATGCCTTGGATGATCAGTTTCCTAAGCATCAACAGCAACAACAATCTCAGCAGCAACAACTTCAGCATCAGCATGAGCAAGATTCACAAGAGGAGATGATGATGATGATGGTTCATCATCAACAACGGAGCAGTGACAACATGAGTAATCGACATGAAGAAGAGAGGATGGTAGATCACAGAGACCCTAATGACATGGGGAAAGTTTTCTTAGAGTGGCTTAAGTCAAACAGAGAGACTGTATCTGCTGATGACTTGAGGAGTGTGAAACTCAAGAAATCTACCATTGAATGTGCTGCTAGGCGATTAGGTGGAGGAAAGGAAGCCATGAAGCAATTGTTAAAGCTAGTGCTTGAATGGGTTCAAACAAATCATCTACAGAAACGGAAGAACATTAAAGAAACACAGCGGAGTACCATTTCCAATCAAGACTTCCAAAGTCCTACAGTGAATCCAGAGTTGTCTAACCCTAACCCTAATGTCAACAACCCCACCAACTCTTCCTTCCACCCTCCTGAACCAAATGCCGTAAACCCATGTGTGCATCCTCACTGGGTTCCTGCACCATCATATATGGAAGATCCATCTGTAGTCATGGCTCCCCCACCACCGTATCCCCAGCCAATGTTTGCTGGGTACATCGGTGGTGATCCTTATTCAACCGGCACTGTCCAAAATTTCAATGGGGCCCCACATACCATGACTCCTTATCCTCCTCCTCCTGCACCTTCGAATTCTGTAGAGTATCACATGCTTGATCCCGCTCATTCATGGCCACCATCTCAGTTCCCTGTTGCTCCACCTTACCCACCTCAATTTCCGGATCCTAATCTTCACCATGGGGCACCATTAGCACCACCTTATCCAAGCTATGTAAATCATTATCAGTACCAATATTTCCAAGGGCCTAGTGAGAGAATGGTAATGAGATCAGGTCCCTCTGCGACAAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGGCGGTATCTGCCACACAGTAGGCATCAACATCATAACCACAGCCATCAAGCACCCCACACTGCCATTGATCAACATGCAAGGCTTGGTACTGAATCTTGCACCACTGCTGGTGCTTCACATGGCAACACGGGCAACTGGGTGTACTGGCCTTCGGTTGCTGCAGGCGGTGCATCGTCTGCATCGCCCATTGTCCAAACTGAAGCCCCACGAGGCCATTCGGGTTTGGATCGGGCCGCCATGCAACCACAGAATAATAAGAGTCGTGGCACCTCAGACAAGAGACAGGCATGGAAGCCTGAGAAGAACTTGAAGTTCCTTTTGCAGAAGGTTTTGAAGCAAAGTGATGTGGGGAGTTTGGGGCGAATTGTTCTGCCAAAGAAGGAAGCAGAAACCCATCTTCCAGAATTGGAAGCAAGAGATGGCATTTCTATTGATATGGAAGACATTGGAACTTCACATGTTTGGAACATGCGATACAGGTACTGGCCCAATAACAAAAGCAGGATGTATCTTCTTGAGAACACAGGGGATTTTGTGAGAGCTAATGGACTCCAAGAGGGAGACTTCATAGTCATATATTCAGATGTCAAATGCGGAAAATATATGATACGAGGAGTGAAAGTAAGGCAATCTACAAAGTCAGAGAACAAAAGAGCAGGAAAATTGCAGAAAACTCAGCATGCAAACGATACAGCTGTTGGTGGTGATGGTTCCACTGCATCTTCCTCATCACGAGGTCACAAAAACCAGTAG 2343 0.4558 MDVKVEEKPRDLRAIGIENYQQGNIAAAEFEARKEDALGVEVDRQIWLENGDDGLLGVNDASMFYADFPPLPDFPCMSSSSSSSSTPVPTKAMTCSSAASTASSATSAVSWAVLKSDAEQDGDKNNTNTDNFHCHFGQHENLLGLPQGSLSSTVSMEIPQPSDHSTRQLDVVDCVDVMENFGYMDLLGNYELFDPSSILRTDNALDDQFPKHQQQQQSQQQQLQHQHEQDSQEEMMMMMVHHQQRSSDNMSNRHEEERMVDHRDPNDMGKVFLEWLKSNRETVSADDLRSVKLKKSTIECAARRLGGGKEAMKQLLKLVLEWVQTNHLQKRKNIKETQRSTISNQDFQSPTVNPELSNPNPNVNNPTNSSFHPPEPNAVNPCVHPHWVPAPSYMEDPSVVMAPPPPYPQPMFAGYIGGDPYSTGTVQNFNGAPHTMTPYPPPPAPSNSVEYHMLDPAHSWPPSQFPVAPPYPPQFPDPNLHHGAPLAPPYPSYVNHYQYQYFQGPSERMVMRSGPSATKEARKKRMARQRRYLPHSRHQHHNHSHQAPHTAIDQHARLGTESCTTAGASHGNTGNWVYWPSVAAGGASSASPIVQTEAPRGHSGLDRAAMQPQNNKSRGTSDKRQAWKPEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISIDMEDIGTSHVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQSTKSENKRAGKLQKTQHANDTAVGGDGSTASSSSRGHKNQ* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02312 780 MobiDBLite consensus disorder prediction 755 780 - -
Pte3g02312 780 MobiDBLite consensus disorder prediction 740 780 - -
Pte3g02312 780 SMART B3_2 637 739 IPR003340 GO:0003677
Pte3g02312 780 MobiDBLite consensus disorder prediction 334 369 - -
Pte3g02312 780 MobiDBLite consensus disorder prediction 590 628 - -
Pte3g02312 780 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 275 747 IPR044800 GO:0003700
Pte3g02312 780 FunFam B3 domain-containing transcription factor FUS3 633 748 - -
Pte3g02312 780 Pfam B3 DNA binding domain 638 734 IPR003340 GO:0003677
Pte3g02312 780 MobiDBLite consensus disorder prediction 209 231 - -
Pte3g02312 780 SUPERFAMILY DNA-binding pseudobarrel domain 636 732 IPR015300 -
Pte3g02312 780 MobiDBLite consensus disorder prediction 209 226 - -
Pte3g02312 780 CDD BfiI_C_EcoRII_N_B3 635 736 - -
Pte3g02312 780 Gene3D - 633 753 IPR015300 -
Pte3g02312 780 MobiDBLite consensus disorder prediction 740 754 - -
Pte3g02312 780 MobiDBLite consensus disorder prediction 338 369 - -
Pte3g02312 780 ProSiteProfiles B3 DNA-binding domain profile. 637 739 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02312 Pte-Chr3 42200178 42203512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02312 41 740 B3 DNA Binding Superfamily AT3G24650 43.896 2.31e-158 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte3g02312 B3 3.5e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02312 K09287 - qsu:112028173 667.922