Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02310 ATGGCAAAGTTGAAGCTTTTCTCTGTCTACATTTTCATCTCTTTCCTCGTCTTCTGTGATTCCACTGCTAGTGGTTTAACTGAGTCTTCGTCTTCTTCTTCTGCTTCCTCTGATGTTGTGCTTCTGTTAGGAAAAATTAGAGCTTCACTTCAAGGTCACAACGAGAACCTACTGTTATCTTCGTGGAACTCCTCTATTCCTCTGTGTCAATGGAGAGGAGTCAAGTGGGTCTTCTCTGATGGTTCTCCTTTGTTATGCAATGACTTGTCTTCACCACAATGGGCTAATGTTTCACTTTACAAAGACCCATCTCTGCATTTGCTTTCACTCCAGCTTCCTTCTGCTAATCTATCTGGTTCTCTTCCCAGAGAAATAGGTGTGTTCCCCATGCTTCAAAGTCTCTACCTTAACATAAACTCACTGAGTGGCAGTATACCTCTTGAGCTTGGCTATAGTTCTTCCCTCACTGACATTGATTTGAGTATGAATATGTTGAGTGGAACACTGCCGGCATCGATCTGGAATTTGTGTGATATGTTGGTTTCTCTTCGACTTCATGGAAATTCACTTTCTGGGTATCTTACTGAACCAGCATTGCCAAACTCCACCTGCAAGAATCTGCAAAATCTTGACTTGGGTAACAACAAGCTTTCTGGGAACTTCCCAGAGTTCATCCCTCGTTTCAGTGAGCTGAAACAGCTTGATTTAGGAGACAACATGTTTTCAGGGTCAATCCCACAGAGTCTAGCAGGCCTTAGCCTTGAAAAATTGAATCTTTCTCATAATAACTTCAGTGGGGAATTACCTGTTTTTGGAGAGTCCAAATATGGGGTAGAGGTATTCGAAGGTAATAGTCCTAGCCTATGTGGGGCTCCTTTGCAAAATTGTATGGCAAGCTCTAGATTGAGTTCTGGTGCAATTGCTGGCTTAGTTATTAGTCTCATGGCCGGGGCTGTGGTTTTAGCTTCATTGCTAATAGGTTATGCACAAAATAAGAAGAGGAAGGGTAAAGGAGAGAGTGAAGATGAACTGGTGGAAGGTGGGGATGAAGAGAATGATAAGAATGCTGGTGGTGGGGGTGGTGAAGGGAAGCTCATATTGTTTGCAGGTGGTGAGCATTTGACACTGGAGGATGTGCTGAATGCAACAGGACAGGTTTTGGAGAAGACATCTTACGGGACTATTTATAAGGCAAAGCTTTCTGATGGAGGAATAATTGCATTGAAATTGTTGAGAGAAGGTAGCTGCAAGGATAGGGCTTCATGCTTGCCAGTGATAAGGCAATTGGGGAAGATTCGTCATGAGAATTTGGTTCCACTGAGAGCATTCTATGAAGGGAAGAGAGGGGAGAAGCTCCTTATCTATGATTATCATCCTCACAAAACCCTTCATGATCTGTTGCATGAAACTAAAACGGGAAGACCAGTGCTAAACTGGGCTAGGCGACACAAGATTGCATTAGGCATAGCCAAGGGAATTGCTTATCTTCACAATGGACTTGACACACCTATAACCCATGGCAATGTGAGATCCAAGAATGTGCTTGTGGATGATTTTTTCATTGCCAGGCTCACTGAGTTTGGACTTGATAAGTTGATGATTCCATCTGTAGCAGACGAAATTGTTGCACATGCAAAGACTGATGGATACAAGGCTCCAGACCTTCAAAAAATGAATAAATGTAATCCAAGGACAGACGTCTATGCGTTTGGGATATTACTATTGGAGATATTGATAGGAAAGAAGCCAGGTAAAGGTGGGAGAAATGGTGAGCATGTGGATTTGCCTTCAATGGTTAAAGAGGCAGTGTTAGAGGAGACAACAATGGAGGTTTTCGATGTGGAGATTTTGAAGGGGATAATGAGTCCCATGGAAGATGGGTTGGTGCAAGCATTGAAGCTTGCCATGGGTTGCTGTGCACCAGTGACAACAGTTAGACCTTCCATGGATGAGGTTGTGAAGCAACTAGAGGAACATAGACCAAGAAATAGGTCAGCATTATACAGCCCCACTGAAACAAGAAGTGGCAGTGGTACTCCATTTTGA 2046 0.4321 MAKLKLFSVYIFISFLVFCDSTASGLTESSSSSSASSDVVLLLGKIRASLQGHNENLLLSSWNSSIPLCQWRGVKWVFSDGSPLLCNDLSSPQWANVSLYKDPSLHLLSLQLPSANLSGSLPREIGVFPMLQSLYLNINSLSGSIPLELGYSSSLTDIDLSMNMLSGTLPASIWNLCDMLVSLRLHGNSLSGYLTEPALPNSTCKNLQNLDLGNNKLSGNFPEFIPRFSELKQLDLGDNMFSGSIPQSLAGLSLEKLNLSHNNFSGELPVFGESKYGVEVFEGNSPSLCGAPLQNCMASSRLSSGAIAGLVISLMAGAVVLASLLIGYAQNKKRKGKGESEDELVEGGDEENDKNAGGGGGEGKLILFAGGEHLTLEDVLNATGQVLEKTSYGTIYKAKLSDGGIIALKLLREGSCKDRASCLPVIRQLGKIRHENLVPLRAFYEGKRGEKLLIYDYHPHKTLHDLLHETKTGRPVLNWARRHKIALGIAKGIAYLHNGLDTPITHGNVRSKNVLVDDFFIARLTEFGLDKLMIPSVADEIVAHAKTDGYKAPDLQKMNKCNPRTDVYAFGILLLEILIGKKPGKGGRNGEHVDLPSMVKEAVLEETTMEVFDVEILKGIMSPMEDGLVQALKLAMGCCAPVTTVRPSMDEVVKQLEEHRPRNRSALYSPTETRSGSGTPF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02310 681 MobiDBLite consensus disorder prediction 657 681 - -
Pte3g02310 681 Gene3D Phosphorylase Kinase; domain 1 369 457 - -
Pte3g02310 681 SUPERFAMILY L domain-like 68 271 - -
Pte3g02310 681 Gene3D Transferase(Phosphotransferase) domain 1 459 673 - -
Pte3g02310 681 Gene3D Ribonuclease Inhibitor 180 298 IPR032675 -
Pte3g02310 681 Pfam Protein tyrosine and serine/threonine kinase 384 656 IPR001245 GO:0004672|GO:0006468
Pte3g02310 681 MobiDBLite consensus disorder prediction 337 358 - -
Pte3g02310 681 ProSiteProfiles Protein kinase domain profile. 381 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02310 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 660 IPR046959 -
Pte3g02310 681 Gene3D Ribonuclease Inhibitor 40 179 IPR032675 -
Pte3g02310 681 MobiDBLite consensus disorder prediction 666 681 - -
Pte3g02310 681 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Pte3g02310 681 Pfam Leucine rich repeat N-terminal domain 43 74 IPR013210 -
Pte3g02310 681 FunFam Leucine-rich repeat receptor-like protein kinase 204 296 - -
Pte3g02310 681 SUPERFAMILY Protein kinase-like (PK-like) 384 657 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02310 Pte-Chr3 42175892 42179350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02310 1 682 Receptor kinase-like Gene Family AT3G24660 74.085 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte3g02310 PK_Tyr_Ser-Thr 2.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02310 - - cave:132166359 1054.66