Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02301 ATGGTAAAAATAAGCAAGATTGCTTATGGAGGAATTTCCTTCTTCCTTGTGGTTGCCGTAGTTTTTAGCGTTACAGCAAATGCATCACAACAAGATGACTCCGATATTCAAAAAATCATCACAAGTGCTTCTAATGAGGCTATGAATAAAGTTTGTGCCGAGACCGAAAACAAGAGTCCCCATTGCGGTCGGAGCCTTGCCGCCACCGAAAAGAATGACGGTGCCTCAAAGTCAACAGCTGACTACATCAAAGATGCAATTGAAGCAGCCCTGAAAGCAGTTTCATCTGCGTTAAATTTATCTGGCGACCTTCACAAAAAGGCTGATAAGTCAAGCCATAAGATGGCCATGGAGGATTGCCAAGACCTTTTACAGTTCGCCGTGGATGAACTGCAGGAATCCTTTTCGTCTGTGGAAAATAATAAAGAGCACTCCATGGATGACAGAGTAGATGATTTGAAAAACTGGTTGAGCGCTGTCATATCCTACCAAGATACGTGCCTTGATGGGGTTCAAGATCCGGACTTGAAGAAAGTAATGTCAAATGGTCTTGTCAATGCCACGGAGTTGACAAGCAGCGCTTTGGCCATCGTTTCTAAGATAACTGGAATACTAAGTGACTATGGTATTTCATTTGATGGTTTCGGTAAAAGGAAGCTTGACGAAACCCACGAAAGCAGTAATGGTCAGTACCCTTCATGGATGTCATCTACGGACAGACAGTTATTAGCAAGCCAAAAACCCGACGCCGTTAAGCCTAATGCAGTGGTAGCGAAAGACGGAAGTGGCCAATATAAAACAATCAAAGAAGCACTTGCAGCTTACCCCAAGAAACACAAAGGAAGATACGTAATTTACGTAAAGGCTGGCATATACAAAGAGCAAGTTTTGGTAGACAAGAAGCAGGCGAATGTGTTTATGTATGGAGATGGACCTCAGAAGACAATCGTGACAGGAAGATTGAACTTTCATGAGGGTACCTCGACCTATCGAACTGCTACATTTGCGGCTGTTGGACCTGGTTTCCTCTGCAAATCAATGGGGTTCGAGAACACGGCAGGGCCTGAGGGACACCAGGCTGTGGCACTTCGTGTTCAATCGGACATGTCTGCATTTTTCAATTGCAGGATGGACGGGTATCAGGACACATTGTACACACAAACCCATCGCCAATTCTACCGCAACTGCGTCATCTCAGGGACAGTTGATTTCATCTTTGGAGATGCCGCAGTCGTAATCCAAAACTCTGAGATTATTGCAAGGATGCCCATGGAAAACCAAAAGAACCTCATTACAGCTTCCGGGAGAGTTGATCCAAATGAAGATACAGGCATAGTCATCCAAAACTGCCAGATTGTTCCTGAGCAGAAACTCTTCCCTGCAAGGTTCAAGATTCCCACCTACTTAGGTCGACCATGGAAGAAATATGCCAGGACTGTGTTCATGGAATCTTCACTTGGGGATCTCATTCACCCGGATGGATGGCTACCATGGGACGGAAACTTCGCGTTGGATACACTTTACTATGCAGAGTACAACAACGTAGGTCCTGGGGCTTCAACGGAGAAGAGGGTAAAGTGGAAGGGATACAAAGTCATCAAGGACAGGAAAGAGGCAGAGAAATTCACAGTAGGACCGTTTCTGAAAGCAAATACATGGCTTCCAGCCACTACCATTGCTTATGGAGGAATTTTCTTCTTCCTTGTGGTTGCCGTAGTTTTTAGCGTTACAGCAAATGCATCCCAACAAGATGACTCCGATATTCAAAAAATCATCACAAGTGCTTCTAATGAGGCTATGAATAAAGTTTGTGCCGAGACCGAAAACAAGAGTCCCCATTGTGGTCGGAGCCTTGCCGCCACCGAAAAGAATGACGGTGCCTCAAAGTCAACAGCTGACTACATCAAAGATGCAATTGAAGCAGCCCTGAAAGCAGTTTCATCTGCACTAAATTTATCTGGCGACCTTCACAAAAAGGCCGATAAGTCAAGCCATAAGATGGCCATGGAGGATTGCCAAGACCTTTTACAGTTCGCTGTGGATGAACTGCAGGAATCCTTTTCGTCTGTGGAAAATAATAAAGAGCACTCCATGGATGACAGGGTAGATGATTTGAAAAACTGGTTGAGTGCAGTCATATCCTACCAAGATACGTGCCTTGATGGGGTTCAAGATCCGGACTTGAAGAAAGTAATGTCAAATGGTCTTGTCAATGCCACGGAGTTGACAAGCAGCGCTTTGGCCATCGTTTCTAAGATAACTGGAATACTAAGTGACTATGGTATTTCATTTGATGGTTTCGGTAAAAGGAAGCTTGACGAAACCCACGAAAGCAGTAATGGTCAGTACCCTTCATGGATGTCATCTACGGACAGACAGTTATTAGCAAACCAAAAACCCGACGCCGTTAAGCCTAATGCAGTGGTAGCGAAAGACGGAAGTGGACAATATAAAACAATCAAAGAGGCACTTGCAGCTTACCCCAAGAAACACAAAGGAAGATATGTAATTTACGTAAAGGCTGGCATATACAAAGAGCAAGTTTTGGTAGACAAGAAGCAGGCGAATGTGTTTATGTATGGAGATGGACCTCAGAAGACAATCGTGACAGGAAGATTGAACTTTCATGAGGGTACCTCGACCTATCGAACTGCTACATTTGCGGCTGTTGGACCTGGTTTCCTCTGCAAATCAATGGGATTCGAGAACACGGCAGGGCCTGAGGGTCACCAGGCTGTGGCACTTCGTGTTCAATCGGACATGTCTGCATTTTTCAATTGCAGGATGGACGGGTATCAGGACACATTGTACACACAAACCCATCGCCAATTCTACCGCAACTGCGTCATCTCAGGGACAGTTGATTTCATCTTCGGAGATGCCGCAGTCGTAATCCAAAACTCTGAGATTATTGCAAGGATGCCCATGGAAAACCAAAAGAACTTAATTACAGCTTCCGGGAGAGTTGATCCAAATGAAGATACAGGCATAGTTATCCAAAACTGCCAGATTGTTCCTGAGCAGAAACTCTTCCCCGCAAGGTTCAAGATTCCCACATACTTAGGTCGACCATGGAAGAAATATGCGAGGACCGTGTTCATGGAATCTTCACTGGGGGATCTCATTCACCCAGATGGATGGCTACCCTGGGACGGAAACTTCGCATTGGATACACTTTACTATGCAGAGTACAACAACGTAGGTCCTGGGGCTTCAACGGATAAGAGGGTAAAGTGGAAGGGATACAAAGTCATCAAGGACAGGAAAGAGGCAGAGAAATTCACAGTAGGACCGTTTCTGAAAGCAAATACATGGCTTCCAGCCACTACCGTGCCATTCTTCGCTGGATTCAAATCCTAA 3360 0.4512 MVKISKIAYGGISFFLVVAVVFSVTANASQQDDSDIQKIITSASNEAMNKVCAETENKSPHCGRSLAATEKNDGASKSTADYIKDAIEAALKAVSSALNLSGDLHKKADKSSHKMAMEDCQDLLQFAVDELQESFSSVENNKEHSMDDRVDDLKNWLSAVISYQDTCLDGVQDPDLKKVMSNGLVNATELTSSALAIVSKITGILSDYGISFDGFGKRKLDETHESSNGQYPSWMSSTDRQLLASQKPDAVKPNAVVAKDGSGQYKTIKEALAAYPKKHKGRYVIYVKAGIYKEQVLVDKKQANVFMYGDGPQKTIVTGRLNFHEGTSTYRTATFAAVGPGFLCKSMGFENTAGPEGHQAVALRVQSDMSAFFNCRMDGYQDTLYTQTHRQFYRNCVISGTVDFIFGDAAVVIQNSEIIARMPMENQKNLITASGRVDPNEDTGIVIQNCQIVPEQKLFPARFKIPTYLGRPWKKYARTVFMESSLGDLIHPDGWLPWDGNFALDTLYYAEYNNVGPGASTEKRVKWKGYKVIKDRKEAEKFTVGPFLKANTWLPATTIAYGGIFFFLVVAVVFSVTANASQQDDSDIQKIITSASNEAMNKVCAETENKSPHCGRSLAATEKNDGASKSTADYIKDAIEAALKAVSSALNLSGDLHKKADKSSHKMAMEDCQDLLQFAVDELQESFSSVENNKEHSMDDRVDDLKNWLSAVISYQDTCLDGVQDPDLKKVMSNGLVNATELTSSALAIVSKITGILSDYGISFDGFGKRKLDETHESSNGQYPSWMSSTDRQLLANQKPDAVKPNAVVAKDGSGQYKTIKEALAAYPKKHKGRYVIYVKAGIYKEQVLVDKKQANVFMYGDGPQKTIVTGRLNFHEGTSTYRTATFAAVGPGFLCKSMGFENTAGPEGHQAVALRVQSDMSAFFNCRMDGYQDTLYTQTHRQFYRNCVISGTVDFIFGDAAVVIQNSEIIARMPMENQKNLITASGRVDPNEDTGIVIQNCQIVPEQKLFPARFKIPTYLGRPWKKYARTVFMESSLGDLIHPDGWLPWDGNFALDTLYYAEYNNVGPGASTDKRVKWKGYKVIKDRKEAEKFTVGPFLKANTWLPATTVPFFAGFKS* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02301 1119 FunFam Pectinesterase 44 202 - -
Pte3g02301 1119 Gene3D - 248 563 IPR012334 -
Pte3g02301 1119 Gene3D - 800 1117 IPR012334 -
Pte3g02301 1119 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Pte3g02301 1119 SMART PMEI_2 43 197 IPR006501 GO:0004857
Pte3g02301 1119 SMART PMEI_2 595 749 IPR006501 GO:0004857
Pte3g02301 1119 CDD PMEI-like_3 51 203 - -
Pte3g02301 1119 Pfam Plant invertase/pectin methylesterase inhibitor 600 749 IPR006501 GO:0004857
Pte3g02301 1119 Pfam Plant invertase/pectin methylesterase inhibitor 48 197 IPR006501 GO:0004857
Pte3g02301 1119 NCBIfam pectinesterase inhibitor domain 566 753 IPR006501 GO:0004857
Pte3g02301 1119 NCBIfam pectinesterase inhibitor domain 13 201 IPR006501 GO:0004857
Pte3g02301 1119 FunFam Pectinesterase 596 754 - -
Pte3g02301 1119 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 202 IPR035513 -
Pte3g02301 1119 CDD PMEI-like_3 603 755 - -
Pte3g02301 1119 FunFam Pectinesterase 800 1117 - -
Pte3g02301 1119 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 598 754 IPR035513 -
Pte3g02301 1119 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 203 IPR035513 -
Pte3g02301 1119 Gene3D Invertase/pectin methylesterase inhibitor family protein 596 755 IPR035513 -
Pte3g02301 1119 Pfam Pectinesterase 806 1102 IPR000070 GO:0030599|GO:0042545
Pte3g02301 1119 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Pte3g02301 1119 FunFam Pectinesterase 248 564 - -
Pte3g02301 1119 ProSitePatterns Pectinesterase signature 2. 950 959 IPR033131 -
Pte3g02301 1119 PANTHER PECTINESTERASE 568 1109 - -
Pte3g02301 1119 SUPERFAMILY Pectin lyase-like 802 1116 IPR011050 -
Pte3g02301 1119 SUPERFAMILY Pectin lyase-like 250 561 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02301 Pte-Chr3 42047237 42054260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02301 62 557 Carbohydrate Esterase AT2G26450 47.887 3.62e-149 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02301 K01051 - egr:104417569 679.093