Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02274 ATGCAATACAGCGAGCACAAATACCAGCTCACAGGTGCCATGTGCCTTCACACTGCTGTTCAGTTAGGCATACCTGACAAAGTTTCCAACCATGGCCGACCAATTACTCTCCCTGAGTTGGCCACAACTCTTCAACTTCATCCGAACAGAACTGTTGCCCTAAACCAGCTCATGCGGTTCCTAACCTTTAAGGGGTTATTTTCCGTAACTGCAATCAATGAAGAGGATGTATTTGTTCTAGCTCCTTCCTCCCATCTTCTCCTAAGTGATATCGAAACTACAATAAATACTGCTATCTCTTCTCTACCCTATGAACCCTTCCATGCTGATCTACTAAAAGTATGGAAAAACTTGGGGGATTGGTTTCTTGGAAACGAACCAATCGCACCATTTAAGTTTGTACATGGTATAGGCTGTTGGGACTATCTTAAAGGAAGTCCTGATGGTTATATTTTCCATGAAACTATGGAGAAGAACTCCAGAACGTTCATTCAATCGTCTGATTTCAAAAAATGTATAGCAGCTTTTGAAGGGTTAGAGTCAATGGTTGATGTTGGGGGTGGAACTGGAGCTGTCGCAAAAACTATTTCTGAAACCTATCCCCTTATGAAATGCATAGTCTTGGATCTCCCAAAAGTTATGGAGAACATAGCCGAACTAACCCAAGGTAACACAAGTTTTGTGGGAGGTGATATGTTTCAGTGTATCCCTACTGCTGATGCTGTACTAATGAAGTGGGTTTTGCATAATTGGGCTGATGAGAAATGTCTATTGATACTGAAAAATGCTAAACATGCCATTTCACATAAAGGAAAAGAAGGGAAAATAATTATCATTGACACAGTTCTGAATGAAGAGAATGAGGCAAAGGAATCGACCAAAGTGAAACTGGTGTTGGATATGACGATGATGATTGCATACAGTGGAAAGGAAAGAACTGAGAGGGAATGGAAGAAGTTGATTATGGAAGCTGGTTTCACCCATTGTAAAATAACACCCTTATCTGAGTATACTTTAAGCTTTGTTATTTGGAAGACACAGCTGGTGCACTCAATAGTCAGGACCATCAAAAGAAGGAACACTGACTTCTTCAGCTTGTTGTGTAGGCACAGGACTACAGACATGGAGCACTACAAGCAGACTTTCAATTTCATAGGAGCGATGTGCCTCAAGTGTGCTGTTCAGCTTGGCATACCTGAGAAAATCTCCAACCATGGCCAACCTGTCACTGTCACTCAGTTGGCCTCTGCAATTCATCTTCAACCAGACAAAATTAGTGGTCTGAACCAGCTCATGCGATACCTAGTCTACATGGAGTTATTCTCCAAAACCAAAATCAATGAAGACGATGCATATCTTCTAGCTCCTTCCTCCAATCTCATCCTGAGTGAAGCAGAAAACACTATAAGCACTGCTAACTCCTCTGCACCCTTGGTATTGGGGCAAGGTCATTCTATGCCATTGAAAGCATGGCAGAACCTAGGGGATTGGTTTCTTACAAAAGAACCAATTTCACCATTTGAGAGTGCAAACGGTGTTGGCTTCTGGGACTTTGTGAAGAACAACCCAGATGGTCGTTTCTTCAATGAATCCATGGAGAATGATTCTAAGATGTTTATTCAATTTGTTCTTAAAGGCTGTTTCCCAGTTTTTGAAAGCTTAGACTCATTGGTTGATGTTGGGGGTGGAACTGGAGCTCTGGCAAAGTCTATTTCTGAGGGATTCCCTGATTTGAAATGCACTGTCTTCGACCTTCCAAATGTTGTGGAGGCTTTGCAGAATCATGGTAACTTAGATTATGTGAGTGGTGACATGTTTCAATCTATACCTCCTGCTGATGCTATATTAATGAAGTGTGTTCTCCATGATTGGAGTGATGAAGACTGTCTATTGATTCTGAAAAATTGCAAAGATGCCATTTCACACAAAGGGAAGGAAGGGAAAGTAATCCTGATTGAGATAGTTCTGAATGAAGAGAGTGACAAGCTGGAATTAACTGAAGTGAAACTCATTTATGATATGACAATGAGGGTTTGCTTCAATGCAAAAGAAAGAACTGAGAAAGAATGGGAGAAGTTGTTTTTGAATGCTGGATTCAGCCATTTTAGGATAACACCTTTACTTGGTTTTAGGTCACTCATTGAGGTCTTCCCTTGA 2157 0.4112 MQYSEHKYQLTGAMCLHTAVQLGIPDKVSNHGRPITLPELATTLQLHPNRTVALNQLMRFLTFKGLFSVTAINEEDVFVLAPSSHLLLSDIETTINTAISSLPYEPFHADLLKVWKNLGDWFLGNEPIAPFKFVHGIGCWDYLKGSPDGYIFHETMEKNSRTFIQSSDFKKCIAAFEGLESMVDVGGGTGAVAKTISETYPLMKCIVLDLPKVMENIAELTQGNTSFVGGDMFQCIPTADAVLMKWVLHNWADEKCLLILKNAKHAISHKGKEGKIIIIDTVLNEENEAKESTKVKLVLDMTMMIAYSGKERTEREWKKLIMEAGFTHCKITPLSEYTLSFVIWKTQLVHSIVRTIKRRNTDFFSLLCRHRTTDMEHYKQTFNFIGAMCLKCAVQLGIPEKISNHGQPVTVTQLASAIHLQPDKISGLNQLMRYLVYMELFSKTKINEDDAYLLAPSSNLILSEAENTISTANSSAPLVLGQGHSMPLKAWQNLGDWFLTKEPISPFESANGVGFWDFVKNNPDGRFFNESMENDSKMFIQFVLKGCFPVFESLDSLVDVGGGTGALAKSISEGFPDLKCTVFDLPNVVEALQNHGNLDYVSGDMFQSIPPADAILMKCVLHDWSDEDCLLILKNCKDAISHKGKEGKVILIEIVLNEESDKLELTEVKLIYDMTMRVCFNAKERTEKEWEKLFLNAGFSHFRITPLLGFRSLIEVFP* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02274 718 PANTHER O-METHYLTRANSFERASE 387 699 IPR016461 GO:0008168
Pte3g02274 718 Gene3D - 370 461 IPR036388 -
Pte3g02274 718 Gene3D - 1 87 IPR036388 -
Pte3g02274 718 Pfam Dimerisation domain 14 62 IPR012967 GO:0046983
Pte3g02274 718 Pfam Dimerisation domain 388 436 IPR012967 GO:0046983
Pte3g02274 718 SUPERFAMILY "Winged helix" DNA-binding domain 376 464 IPR036390 -
Pte3g02274 718 Gene3D Vaccinia Virus protein VP39 470 718 IPR029063 -
Pte3g02274 718 Gene3D Vaccinia Virus protein VP39 96 342 IPR029063 -
Pte3g02274 718 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 341 IPR029063 -
Pte3g02274 718 Pfam O-methyltransferase domain 491 700 IPR001077 GO:0008171
Pte3g02274 718 Pfam O-methyltransferase domain 115 326 IPR001077 GO:0008171
Pte3g02274 718 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 475 716 IPR029063 -
Pte3g02274 718 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 347 IPR016461 GO:0008168
Pte3g02274 718 CDD AdoMet_MTases 557 656 - -
Pte3g02274 718 FunFam O-methyltransferase ZRP4 470 718 - -
Pte3g02274 718 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 378 718 IPR016461 GO:0008168
Pte3g02274 718 SUPERFAMILY "Winged helix" DNA-binding domain 5 90 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02274 Pte-Chr3 41440590 41459785 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02274 388 704 Monolignol Biosynthesis Gene Families AT5G54160 34.356 3.04e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02274 K22588 K13262 qsu:111988269 360.918