Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02272 ATGGAGAAGTACTCCAGAACGTTCATTCAATCGTCTGATTTCAAAAAATGTATAGCAGCTTTTGAAGGGTTAGAGTCAATGGTTGATGTTGGGGGTGGAACTGGAGCTGTCGCAAAAACTATTTCTGAAACCTATCCCCTTATGAAATGCATAGTCTTGGATCTCCCAAAAGTTATGGAGAACATAGCTGAACTAACCCAAGGTAACACAAGTTTTGTGGGAGGTGATATGTTTCAGTGTATCCCTACTGCTGATGCTGTACTAATGAAGTGGGTTTTGCATAATTGGGCTGATGAGAAATGTCTATTGATACTGAAAAATGCTAAACATGCCATTTCACATAAAGGAAAAGAAGGGAAAATAATTATCATTGACACAGTTCTGAATGAAGAGAATGAGGCAAAGGAATCGACCAAAGTGAAACTGGTGTTGGATATGACGATGATGATTGCATACAGTGGAAAGGAAAGAACTGAGAGGGAATGGAAGAAGTTGATTATGGAAGCTGGTTTCACCCATTGTAAAATAACACCCTTATCTGGTTTTATGTCACTCATTGAAGTCTTCCCTTAA 573 0.3874 MEKYSRTFIQSSDFKKCIAAFEGLESMVDVGGGTGAVAKTISETYPLMKCIVLDLPKVMENIAELTQGNTSFVGGDMFQCIPTADAVLMKWVLHNWADEKCLLILKNAKHAISHKGKEGKIIIIDTVLNEENEAKESTKVKLVLDMTMMIAYSGKERTEREWKKLIMEAGFTHCKITPLSGFMSLIEVFP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02272 190 Pfam O-methyltransferase domain 19 171 IPR001077 GO:0008171
Pte3g02272 190 Gene3D Vaccinia Virus protein VP39 1 190 IPR029063 -
Pte3g02272 190 PANTHER O-METHYLTRANSFERASE 15 173 IPR016461 GO:0008168
Pte3g02272 190 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 188 IPR029063 -
Pte3g02272 190 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 190 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02272 Pte-Chr3 41396200 41396988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02272 20 189 Monolignol Biosynthesis Gene Families AT5G54160 40.116 4.79e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02272 K22588 - qsa:O6P43_031894 218.779