Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02270 ATGGCAATTCATGGAAATTACCAAGCTGAATCAGGAGGCATTCTTGAGAACGTTTGGGCAAGTTTTGTAGGTGATGATGTAGCTGGAAGAGGAAAAGGACATGCACAAGAATTTAATCTCAACTCCTGGGAAGAACTACCAAACCTTGATTGTGGAGATGAACCTACGAAAATGCTGGAAAGGCTTCCAAGTTTAGGTAGGTGGATATCAATGGGAGCTGACGAATGGGAGGAGCTCTTGAATACTTCACTGTCTGCAAGCAATAGAGAACAATATTCCTGCAATGATCGTTTGGCAGATAACATTATTGCAAATGATATGAACAAAAAAGCAAAAGCTACAAGGGTAGAGAGGGTTGTTGAAAAACACTACAGGGGAGTAAGGAGAAGGCCATGGGGTAAATATGCAGCAGAAATTAGAGACTCGTCAAAGAAAGGTGCAAGGGTTTGGCTTGGAACGTTTGATACTGCTGAGGAAGCAGCTTTGGCTTATGACAAGGCTGCTTTGAGAATGAGAGGCCCTAAGGCATACCTTAATCATTCAATTGAGATAGTTACAAAGGCTTTAGGACAAGAATATGGCCAAGGAAATGAGCTTTGTTCACCATCATGTAGTTGTGATAACAAGGGATACTCCTACTCACCTTCAGCTTGTGCATGCTGTCCATTCAGACAGGATCCTGTCCGTTCTCGTAAAAGGGTTTCAAGAATTTGGGATGAAAACGTTGACTTTAATTTCAAGCAAGCACCATCAAAGAAAATGGCAACCATGGTCAAGAATGAAAATGATGTACTTGTCTTGCAAGACCTCGGAAGTGATTATTTGGAAACTTTGCTGTCTTCTTTTTGA 849 0.4146 MAIHGNYQAESGGILENVWASFVGDDVAGRGKGHAQEFNLNSWEELPNLDCGDEPTKMLERLPSLGRWISMGADEWEELLNTSLSASNREQYSCNDRLADNIIANDMNKKAKATRVERVVEKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRMRGPKAYLNHSIEIVTKALGQEYGQGNELCSPSCSCDNKGYSYSPSACACCPFRQDPVRSRKRVSRIWDENVDFNFKQAPSKKMATMVKNENDVLVLQDLGSDYLETLLSSF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02270 282 PANTHER DNA-BINDING DOMAIN 101 277 IPR044808 GO:0003700|GO:0009873
Pte3g02270 282 SMART rav1_2 123 187 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 Pfam AP2 domain 123 173 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 SUPERFAMILY DNA-binding domain 123 181 IPR016177 GO:0003677
Pte3g02270 282 CDD AP2 122 179 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 ProSiteProfiles AP2/ERF domain profile. 123 181 IPR001471 GO:0003700|GO:0006355
Pte3g02270 282 FunFam Ethylene-responsive transcription factor 2 122 182 - -
Pte3g02270 282 Gene3D AP2/ERF domain 122 183 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02270 Pte-Chr3 41353183 41354031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02270 5 283 AP2-EREBP Transcription Factor Family AT4G18450 35.077 1.94e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g02270 AP2 1.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02270 - - gmx:112999553 264.618