Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02269 ATGCAGCCACTGCTCCTCCACTCCTGCATCATATACTTAAAGCTTATAGTCATGTACTACACCGAGCCCAAATACCAGTTAGTAGGTGCCATGTGCCTTCACACTGCTGTTCAGTTAGGCATACCTGACAAAGTTTCCAACCATGGCCGACCAATTACTCTCCCTGAGTTGGCCACAGCTCTTCATCTTCATCCAAACAGAAATGTAGCCTTAAATCAGCTCATGCGATTCCTAGTGTTTAAGGGTTTATTTTCCACAACCATAATCAATGAAGAGGATGCATATGTTCTAGCTCCTTCCTCCCACCTTTTCCTGAGTGACATTGAAACTACAATAAGTACTGCTATGTCTTCTCCACCCTCAGTGCTCGGACTATTTGAACCCTTCCATGCCGGTATTCTAAAAGCATGGAAACACTTAGGGAATTGGTTCCTTGGTGACGAACCAATCACACCATTTAAGTTCGCACATGGTATAAGCTTTTGGGAATACATTAAGGAAACTCCTGATGGACATACTTTGCATGAAACTATGGAGATCTACTCTAAAAAGTTTATTGAATCGTCTGATTTAAAAACTTGTTTAGCAGCTTTTGAAGGGTTAGGGTCAATGGTTGATGTTGGAGGTGGAACTGGAGCTCTAGCAAAAGCTATTTCGGAGACCTATCCCCATATGGAATGCATAGTCTTGGATCTCCCACAAGTTTCGGAGAACATGCCACCGCCAACACAAGGTAACTTACGTTATGTGGGAGGTGACATGTTTCATTGTATCCCACCTGCTGAAGGTGTACTAATGAAGTGGATTTTGCATAATTGGAGTGATGAGAAATGTCATTTGATACTGAAAAATTGTAAAGATGCCCTTTCACAAAAAGGGAAACAAGGAAAAATAATTATCATTGACGATATTCTAAATCAAGAAAATGATGGACAAGAATCAGCTGCACACAAATTCATTCGTGATATGATGATGATGCTTTTATTCAATGGAAAGGAAAGAACTGAGCCAGAATGGAAGAAGTTGATCGTGGAAGCTGGTTTCAGCCATTACAAAATAATACCACTACTAGATTTTAGGTCACTTATTGAAGTCTTCCCTTAA 1104 0.4049 MQPLLLHSCIIYLKLIVMYYTEPKYQLVGAMCLHTAVQLGIPDKVSNHGRPITLPELATALHLHPNRNVALNQLMRFLVFKGLFSTTIINEEDAYVLAPSSHLFLSDIETTISTAMSSPPSVLGLFEPFHAGILKAWKHLGNWFLGDEPITPFKFAHGISFWEYIKETPDGHTLHETMEIYSKKFIESSDLKTCLAAFEGLGSMVDVGGGTGALAKAISETYPHMECIVLDLPQVSENMPPPTQGNLRYVGGDMFHCIPPAEGVLMKWILHNWSDEKCHLILKNCKDALSQKGKQGKIIIIDDILNQENDGQESAAHKFIRDMMMMLLFNGKERTEPEWKKLIVEAGFSHYKIIPLLDFRSLIEVFP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02269 367 FunFam O-methyltransferase ZRP4 117 367 - -
Pte3g02269 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 367 IPR016461 GO:0008168
Pte3g02269 367 PANTHER O-METHYLTRANSFERASE 30 352 IPR016461 GO:0008168
Pte3g02269 367 SUPERFAMILY "Winged helix" DNA-binding domain 25 107 IPR036390 -
Pte3g02269 367 Gene3D Vaccinia Virus protein VP39 125 367 IPR029063 -
Pte3g02269 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 365 IPR029063 -
Pte3g02269 367 PIRSF O-mtase 17 367 IPR016461 GO:0008168
Pte3g02269 367 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pte3g02269 367 Gene3D - 20 104 IPR036388 -
Pte3g02269 367 Pfam O-methyltransferase domain 137 349 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02269 Pte-Chr3 41298613 41300600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02269 31 354 Monolignol Biosynthesis Gene Families AT5G54160 31.953 3.72e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02269 K22588 - qsu:111989180 319.316