Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02268 ATGGATCGCGGAGAGCCCTTCTATCAATTCATCGGATCTATGTTCCTTAACACTGCTGTTCAGTTAGCTATACCTGACAAAGTTTCCAACCATGGCCGACCAATTACTCTCTCTGAGTTGGCCACAGCTCTTCATCTTCATCCGAACAGAACTGTAGCCCTACACCAGCTCATGCGATTCCTAGTAGTTAAGGGTTTATTTTCCAGAGCTACAGTCAATGAAGAGGATGCATATGTCCTAGCCTCTTCCTCCCACCTTCTCCTACGTGATATTGAAACTACAATAAGTACTGCTATCTCTTCTCCACCCTCAGTGCTGGGACCATATGAACCCTTCCATGCTGCTTTACTAAAAGCATGGAAGAACTTAAGGGATTGGTTCCTTGGTAACGAACTGATCACACCATTTCAGTTTGCACATGGTATAAGCTATTGGGACTACCTTAAAGGAAGTCCTGATGGTTATATTTTCCATGAAACTATGGAGAATGACTCCAGAATGTTCATTGAATCCTCTGATTTCAAAACTTGTTTAGCAGCTTTTGAAGGGTTAAACTCAATGGTTGATGTTGGAGGTGGAACTGGAGCTCTAGCAAAAGCTATTTCGGAGACCTATCCCCATATGGAATGCATAGTCTTGGATCTCCCACAAGTTTCGGAGAACATGCCACCGCCAACACAAGTGGATTTTGCATAA 696 0.4339 MDRGEPFYQFIGSMFLNTAVQLAIPDKVSNHGRPITLSELATALHLHPNRTVALHQLMRFLVVKGLFSRATVNEEDAYVLASSSHLLLRDIETTISTAISSPPSVLGPYEPFHAALLKAWKNLRDWFLGNELITPFQFAHGISYWDYLKGSPDGYIFHETMENDSRMFIESSDFKTCLAAFEGLNSMVDVGGGTGALAKAISETYPHMECIVLDLPQVSENMPPPTQVDFA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02268 231 Pfam Dimerisation domain 14 62 IPR012967 GO:0046983
Pte3g02268 231 Pfam O-methyltransferase domain 120 223 IPR001077 GO:0008171
Pte3g02268 231 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 231 IPR016461 GO:0008168
Pte3g02268 231 SUPERFAMILY "Winged helix" DNA-binding domain 7 90 IPR036390 -
Pte3g02268 231 PANTHER O-METHYLTRANSFERASE 13 219 IPR016461 GO:0008168
Pte3g02268 231 Gene3D Vaccinia Virus protein VP39 110 231 IPR029063 -
Pte3g02268 231 Gene3D - 5 87 IPR036388 -
Pte3g02268 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 220 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02268 Pte-Chr3 40951123 41288588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02268 14 223 Monolignol Biosynthesis Gene Families AT5G54160 28.111 7.14e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02268 K22588 - qsu:111989181 192.971