Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02263 ATGGATCGCGGAGAGCCCTTCTATCAATTCATAGGATCTATGTTCCTTAACACTGCTGTTCAGTTAGCTATACCTGACCAAGTTTCCAACCATGGCCGACCAATTACTCTCTCTGAGTTGGCCACAGCTCTTCATCTTCATCCGAACAGAACTGTAGCCCTACACCAGCTCATGCGATTCCTAGTATTTAAGGGTTTATTTTCCAGAGCTACAGTCAATGAAGAGGATGCATATGTCCTAGCTCCTTCCTCCCACCTTCTCCTACGTGATATTGAAACTACAATAAGTACTGCTATCTCTTCTCCATCCTCAGTGCTGGGACCATATGAACCCTTCCATGCTGCTTTACTAAAAGCATGGAAAAACTTAAGGGATTGGTTCCTTGGTAACGAACTGATCACACCATTTCAGTTTGCACATGGTATAAGCTATTGGGACTACCTTAAAGGAAGTCCTGATGGTTATATTTTCCATGAAACTATGGAGAATGACTCCAGAATGTTCATTGAATCCTCTGATTTCAAAACTTGTTTAGCAGCTTTTGAGGGGTTAAACTCAATGGTTGATGTTGGAGGTGGAACTGGAGCAGCCGCAAAAGCTATTTCCGAGACATATCCTCATATGAAATGCATCGTCTTGGATCTCCCAGAAGTTGTGGAGAACATGCCACAATTCACTCATGGTAACTTGAGTTATGTTGGAGGCGACATGTTTCAATGTATCCCGCGTGCTGATGCTGAACTATTTAAGTGGGTTCTACATAATTGGAGTAATGAGAAGTGTCTATCGATACTGAAAAATTCTAAACATGCCATTTCACGTAAAGGGATTGAAGGGAAAATAATTATCATTGATTTAGTTCTAAACGAAGAGAATGAAGGACAAGAATCAATGGCCAAACTTAAATACATATTTGATCTGATCATGATGCTTGTATCGAATGGAAAGGAAAGAACTGCTAGACAATGGAAGAAGTTGATAACAGAAGCTGTGTCTCTCGAACCCTCTACACTCGACCAGACCTCCTGCCTCCTTCTGCTTCTCGCCGTAGCTGATTCGTTGGCCTCTCTGTCTCTCAGCCGGTCTCCGTCTCCTCAGCTCTTCCTCGGCGTCCCAACCTTCTTCAACGGTGAGGTATTTTTTGCCTCTCCCATCTCAGTTTTGTCTCGCGAACGTTGA 1179 0.4309 MDRGEPFYQFIGSMFLNTAVQLAIPDQVSNHGRPITLSELATALHLHPNRTVALHQLMRFLVFKGLFSRATVNEEDAYVLAPSSHLLLRDIETTISTAISSPSSVLGPYEPFHAALLKAWKNLRDWFLGNELITPFQFAHGISYWDYLKGSPDGYIFHETMENDSRMFIESSDFKTCLAAFEGLNSMVDVGGGTGAAAKAISETYPHMKCIVLDLPEVVENMPQFTHGNLSYVGGDMFQCIPRADAELFKWVLHNWSNEKCLSILKNSKHAISRKGIEGKIIIIDLVLNEENEGQESMAKLKYIFDLIMMLVSNGKERTARQWKKLITEAVSLEPSTLDQTSCLLLLLAVADSLASLSLSRSPSPQLFLGVPTFFNGEVFFASPISVLSRER* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02263 392 Gene3D Vaccinia Virus protein VP39 110 335 IPR029063 -
Pte3g02263 392 Pfam Dimerisation domain 14 62 IPR012967 GO:0046983
Pte3g02263 392 SUPERFAMILY "Winged helix" DNA-binding domain 7 90 IPR036390 -
Pte3g02263 392 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 351 IPR016461 GO:0008168
Pte3g02263 392 PANTHER O-METHYLTRANSFERASE 13 330 IPR016461 GO:0008168
Pte3g02263 392 PIRSF O-mtase 5 345 IPR016461 GO:0008168
Pte3g02263 392 Pfam O-methyltransferase domain 120 330 IPR001077 GO:0008171
Pte3g02263 392 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 102 330 IPR029063 -
Pte3g02263 392 Gene3D - 5 87 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02263 Pte-Chr3 40899181 40911367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02263 14 326 Monolignol Biosynthesis Gene Families AT5G54160 29.063 8.39e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02263 K22588 - qsu:111988269 306.219