Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02258 ATGAGTCGTGGAATAGCAACGGGTACAAAGGGAAAGAAGAAGGGAGCGTCGTTCGTGATCGACTGCTCGAAACCTGTGGAGGATAAGATCATGGACATCACCTCACTGGAGAAGTTCCTTCAGGAAAGGATCAAGGTAGGTGGGAAAGCCGGTAACTTGGGTGATGCCGTCACTATTACTAGGGAGAACAACAAGATCACTGTAACCTCTGACAGCGCCTTCTCCAAAAGGAGAAGGGAGCTCGACAAGGAACCAGGAGGAACAATCGAGTTAAAGCCCAAGGAAGGTTAA 291 0.4914 MSRGIATGTKGKKKGASFVIDCSKPVEDKIMDITSLEKFLQERIKVGGKAGNLGDAVTITRENNKITVTSDSAFSKRRRELDKEPGGTIELKPKEG* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02258 96 MobiDBLite consensus disorder prediction 72 96 - -
Pte3g02258 96 MobiDBLite consensus disorder prediction 70 96 - -
Pte3g02258 96 Gene3D - 5 85 IPR038526 -
Pte3g02258 96 FunFam 60S ribosomal protein L22-2 5 83 - -
Pte3g02258 96 PANTHER 60S RIBOSOMAL PROTEIN L22 6 77 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pte3g02258 96 Pfam Ribosomal L22e protein family 14 77 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02258 Pte-Chr3 40838538 40840987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02258 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 79.221 1.76e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02258 K02891 - pop:7455994 128.257