Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02227 ATGCTAAACAAGCTGGAAGTAAATTTTTTAGTCAGTAATCAGCACCAGACACTTTCTCTTTCTCATTCATCTGTTGACAAACTTAAGTCCGGCTCCGGAACCCCACAGGAAATGGAAATTGGGTCTCGGGCTGCAGCCTCTTGTCTGCTTAATAGTTTTTTGGTTTCATCAGCTGCTATTGCTGCTCCTGCTCCCGTCCCTTATAGCTATACTAGATATTGCGCTAGTTTAAGAAGAAGCAGACTGGGATGTGGGCTCTTTATTACTCTTGACCATTGTGAAGTGAGGTGTGCCTGTATAGTTGGTTCATATCGAAAATCTGGTTTTCCACAAAACCATGTAGGGATTTGGGAAGAGCCTGATGGTGGGAGTGGCAGTGAATCTGATGAGGATGAAGATGAGCAAGAGGAAGAGAGCAATTATGATTTTGAAAGTGACTGGGAAGAGGAGAAACAGATAAAGTCTTCAGCTGATAAAGTTGTTAAAACTTCAACAGATTCATATGAGGATAGTATGAAGAAAGAGGTCGAACAACTACTGGAACCTGAAGAAAAGGCTATTTTGTTACTGAATGTGACCCCGCAATTAGAGAAAATATCAACAGGAAAATGGAGCCCACTGCACACCCTTACACTATCTGGGCAGATAAGTTTCATGGATAAGTTGCTTGAAAATGGTTATGATATCAATTTTCTCAACGAGGAGGGTATGACTGCACTTCATAAGGCCATTATAGGCAAAAAGGAAGCTGTGATAAGTCATCTTCTGAGAAAAGGTGCAAGTCCTCATGTCGTAGATAAGAATGGTGCTACTCCTCTTCACTATGCCGTTCAAGTTGGTGCAAAACAAACCGTGAAGTTACTGATCAAGTATAAGGTTAATGTCAATGTTGCAGATAATGAAGGTTGGACTCCATTGCATATTGCCATTCAAAGCCGGAATCGAGAGATAGCAAAAATTTTGTTAGTCAATGGTGCAGACAAGACTAGACGAAATAAGGATGGGAAAACGCCTCTGGATTTGAGTCTGTGTTATGGGAAGGAATTCAAGTCTTATGACCTTGCCAAACTACTGAAGGTAGTTCCAGCAAACAGAGATCTGTAA 1104 0.4121 MLNKLEVNFLVSNQHQTLSLSHSSVDKLKSGSGTPQEMEIGSRAAASCLLNSFLVSSAAIAAPAPVPYSYTRYCASLRRSRLGCGLFITLDHCEVRCACIVGSYRKSGFPQNHVGIWEEPDGGSGSESDEDEDEQEEESNYDFESDWEEEKQIKSSADKVVKTSTDSYEDSMKKEVEQLLEPEEKAILLLNVTPQLEKISTGKWSPLHTLTLSGQISFMDKLLENGYDINFLNEEGMTALHKAIIGKKEAVISHLLRKGASPHVVDKNGATPLHYAVQVGAKQTVKLLIKYKVNVNVADNEGWTPLHIAIQSRNREIAKILLVNGADKTRRNKDGKTPLDLSLCYGKEFKSYDLAKLLKVVPANRDL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02227 367 MobiDBLite consensus disorder prediction 123 145 - -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat profile. 202 234 IPR002110 GO:0005515
Pte3g02227 367 ProSiteProfiles Ankyrin repeat region circular profile. 301 327 - -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat region circular profile. 268 300 - -
Pte3g02227 367 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 162 359 - -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat profile. 268 300 IPR002110 GO:0005515
Pte3g02227 367 Pfam Ankyrin repeats (3 copies) 250 332 IPR002110 GO:0005515
Pte3g02227 367 Gene3D - 165 271 IPR036770 -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat profile. 301 333 IPR002110 GO:0005515
Pte3g02227 367 SUPERFAMILY Ankyrin repeat 188 346 IPR036770 -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat region circular profile. 235 267 - -
Pte3g02227 367 SMART ANK_2a 202 231 IPR002110 GO:0005515
Pte3g02227 367 SMART ANK_2a 334 367 IPR002110 GO:0005515
Pte3g02227 367 SMART ANK_2a 268 297 IPR002110 GO:0005515
Pte3g02227 367 SMART ANK_2a 301 330 IPR002110 GO:0005515
Pte3g02227 367 SMART ANK_2a 235 264 IPR002110 GO:0005515
Pte3g02227 367 MobiDBLite consensus disorder prediction 112 148 - -
Pte3g02227 367 Gene3D - 272 361 IPR036770 -
Pte3g02227 367 ProSiteProfiles Ankyrin repeat profile. 235 267 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02227 222 348 Ion Channels AT2G25600 34.646 6.27e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02227 - - qsa:O6P43_016942 374.785