LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte3g02226	ATGGAGGAAGATTTTGATATGCCACCAGTTGAGGAGATGAACGAGGACTATGGGCTTGAAGGAGAGAGTACCATTCTCAAGGTTGGCGAGGAGAAGGAGATCGGCAAACAAGGACTCAAGAAAAAGCTTGTCAAGGAAGGTGAAGGATGGGATACTCCTGAAGTGGGTGATGAGGTTGAAGTGCATTATACTGGTACACTGCTTGATGGCACTAAGTTCGATTCAAGCCGAGACAGAGGATCGCCATTCAAGTTCACTCTTGGCCAAGGACAAGTAATTAAAGGATGGGACCAAGGAATCAAGACCATGAAGAAAGGTGAAAATGCTGTTTTTACCATCCCGTCAGAACTTGCTTACGGCGAGACTGGATCTCCTCCAACAATCCCTGCCAATGCTACTCTGCAATTTGATGTTGAGCTACTCTCTTGGACAAGTGTGAAGGACATATGCAAGGATGGAGGAATATTTAAGAAGATAATTGCTGAAGGCGAGAAATGGGAGAATCCAAAGGATGCTGATGAAGTGTTAGTTAAATATGAAGCACGGCTTGAAGATGGAACACTAGTTTCTAAATCTGATGGAGTGGAGTTTACGGTTAAAGAAGGTCATTTCTGCCCTGCACTGTCAACAGCTGTCAAAACCATGAAGAAGGGAGAGACAGTTCTTCTTACAGTCAAACCTAAATATGGATTTGGGGAAAATGGCAAGCCTGCACAAGGTGATGAAGCCGCTGTTCCACCTAATGCAACTCTGCAAGTCTCTCTTCAGTTGATGTCATGGAAGACTGTGACGGAAATTACTGATGACAAGAAGGTCCTCAAGAAGATTCTGAAAGAAGGGGAGGGATATGAGCGACCAAATGAAGGAGCTGTAGTAAAAGTGAAACTAATTGGTAAACTGGATGACGGTACTGTTTTTGTGAAAAAGGGCCATAATGAAGGAGAAGAGCTTTTCGAGTTTAAGACAGATGAGGAGCAAGTTATTGATGGGCTTGATAGAGCTGTCGTTACAATGAAAAAGGGGGAAGTTGCCTTGTTGACAATCGCTACAGAGTATGCTTTTGGGTCGTCAGGTTCCCAGCAAGAACTTGCGATGGTTCCTCCTAACTCCACTGTATACTACGAAGTGGAGATGGTGTCATTTGAGAAGGAGAAGGAATCATGGGATATGAATACCCAAGAGAAGATTGAAACTGCAGGTAAGAAGAAGGAGGAAGGAAATGTATTATTCAAGGCCGGAAAATATTTTAGAGCTTCAAAGAGATATGAAAAGGTGAGTTCCATCTATGAATCTTCATGCTCAAGCGACAACCATAGACAACTGATTAGCTGA	1332	0.4332	MEEDFDMPPVEEMNEDYGLEGESTILKVGEEKEIGKQGLKKKLVKEGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGSPFKFTLGQGQVIKGWDQGIKTMKKGENAVFTIPSELAYGETGSPPTIPANATLQFDVELLSWTSVKDICKDGGIFKKIIAEGEKWENPKDADEVLVKYEARLEDGTLVSKSDGVEFTVKEGHFCPALSTAVKTMKKGETVLLTVKPKYGFGENGKPAQGDEAAVPPNATLQVSLQLMSWKTVTEITDDKKVLKKILKEGEGYERPNEGAVVKVKLIGKLDDGTVFVKKGHNEGEELFEFKTDEEQVIDGLDRAVVTMKKGEVALLTIATEYAFGSSGSQQELAMVPPNSTVYYEVEMVSFEKEKESWDMNTQEKIETAGKKKEEGNVLFKAGKYFRASKRYEKVSSIYESSCSSDNHRQLIS*	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte3g02226	443	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.	56	144	IPR001179	GO:0003755
	Pte3g02226	443	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.	289	382	IPR001179	GO:0003755
	Pte3g02226	443	MobiDBLite	consensus disorder prediction	1	20	-	-
	Pte3g02226	443	SUPERFAMILY	FKBP-like	33	153	-	-
	Pte3g02226	443	Gene3D	Tetratricopeptide repeat domain	385	441	IPR011990	GO:0005515
	Pte3g02226	443	PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	153	264	-	-
	Pte3g02226	443	FunFam	Peptidylprolyl isomerase	148	261	-	-
	Pte3g02226	443	SUPERFAMILY	FKBP-like	266	399	-	-
	Pte3g02226	443	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.	172	261	IPR001179	GO:0003755
	Pte3g02226	443	Gene3D	-	28	147	IPR046357	GO:0003755
	Pte3g02226	443	Gene3D	-	262	383	IPR046357	GO:0003755
	Pte3g02226	443	FunFam	Peptidylprolyl isomerase	262	384	-	-
	Pte3g02226	443	MobiDBLite	consensus disorder prediction	1	18	-	-
	Pte3g02226	443	FunFam	Peptidylprolyl isomerase	29	147	-	-
	Pte3g02226	443	SUPERFAMILY	FKBP-like	148	264	-	-
	Pte3g02226	443	Gene3D	-	148	261	IPR046357	GO:0003755
	Pte3g02226	443	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase	52	141	IPR001179	GO:0003755
	Pte3g02226	443	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase	283	378	IPR001179	GO:0003755
	Pte3g02226	443	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase	167	255	IPR001179	GO:0003755

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte3g02226	Pte-Chr3	40180755	40184851	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte3g02226	1	440	Calmodulin-binding Proteins	AT3G25230	76.802	0.0	681

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte3g02226	K09571		-	mof:131156749	740.725