Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02225 ATGGAGAATGATATTTTCATGAATGCTGGAATTCCACCGTCATTGCAATTTCAGCCATCTTGGCGGCCATTGCCTTCTGCCATGGATATTCAACACACCCCGGAACTGAATTCTTCCTCCGATTTGTTTCATCCCACATGGGACAGAAGTACAATGGATCATCAAAGTGTTCATCACTTTGATTCAGAACTAAGCTCAATGGTGTCGTCACCAGCAGCTTCAAATTCCAACATCCCCAATGACAACTACTTCATCAGAGAATTGATAGGGAAATTGGGCAATATTGGAAGTTCTTCTGAGATCTCACCTCATTCTCGAACTTTCATGGCCACTAGTGCTAACACTTCATGTTATAGCACTCCAATGAATTCTCCACCAAAGCTTAACAGGCCAATGATGAATCAGAATTTGCCAAATTTGGTGAAGTCAATACCTTTGAGTTCAAGTGTGGCAGAATTCTCAGCTGACCCGGGATTTGCAGAGAGGGCTGCAAAGTTTTCTTGCTTTGGCAGCAGGAGTTTCAACAGCAGAACAAGCCAAATTGGCGTGAACGGTACTCAATTCCACAACAGATCTAATCTTCCATTAATAGCAAACGGAAAGCTTCAACGAGTTGCTAGTAGCCCATCTCTGAAAGTTCTTGGATTACAAAATGGAGTGCAGGGAAACAAGAACTCTGCAGTGCAGGATCCGATGAAGCTGACCAGTTCTTTAGAAGAATCTACTGTCCCTGAACAAACCCCCCACGGGGAAACGGCTGTAAAGGCTTGCAGTGATTTGAATTCTAGAAAGAGAAAAGCTTCTTCCAAAGGAAAAGGCAAAGAAAGTGCATCATCGCTCAGTACTCAGGTGGTTGAGACAAAAGAATCCACAAACCCGAAGCGGTGCAAGATAAATGAGAACGATAAGAATGAAGATGGTGCTTTCAAGACCGATGAAGAATCTAAAGAAGTCAGTGATAACGGAAAAGATGAGAAACATAACAAGAGCAGTCCAAAACCACCTGAGCCTCCCAAGGATTACATTCATGTCAGAGCAAGAAGAGGCCAAGCAACTGATAGTCATAGTCTTGCAGAAAGAGTTCGGAGGGAGAAGATCAGTGAGAGGATGAAGCTTCTTCAAGACATTGTACCTGGTTGCAATAAGGTTACTGGGAAAGCACTGATGCTTGATGAAATAATAAACTATGTTCAGTCATTGCAGCGTCAAGTTGAGTTTCTATCAATGAAACTGGCGTCTGTGAATACTAGGATGGACTTTAGCATAGACCATCTCATGTCAAAGGATATTTTCCAATCAAATAACACTTTGCCTCACCCAATATATCCCATGGATTCCTCAGCGTCAGCTTATTATGGTCATCAGCATCAACCCCAGCAAAATCCAGCACTGCACAACAACATTTCGAGTGGCTCTGTGTCCCACAGATCAGTGGACCACCCCTTAGAATCTACACTGTGCCAAGACCTTGGAATGCAGTTACCTCTACTGAATGGTTTTGGTGAAAGTCTTTCTGAGTACCCAACATTCTCTGGAGATGACCTCCAAACAATTGTGCAAATGGGGTTCAGCCAAAATCTCAACAGGGATACAGCCAAGTCGTCCCAACCCCAATGCCTAAAAGGCTCAAATCAAGTAGCTCACTTGAAAGTGGAACTGTGA 1662 0.4338 MENDIFMNAGIPPSLQFQPSWRPLPSAMDIQHTPELNSSSDLFHPTWDRSTMDHQSVHHFDSELSSMVSSPAASNSNIPNDNYFIRELIGKLGNIGSSSEISPHSRTFMATSANTSCYSTPMNSPPKLNRPMMNQNLPNLVKSIPLSSSVAEFSADPGFAERAAKFSCFGSRSFNSRTSQIGVNGTQFHNRSNLPLIANGKLQRVASSPSLKVLGLQNGVQGNKNSAVQDPMKLTSSLEESTVPEQTPHGETAVKACSDLNSRKRKASSKGKGKESASSLSTQVVETKESTNPKRCKINENDKNEDGAFKTDEESKEVSDNGKDEKHNKSSPKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDIVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDFSIDHLMSKDIFQSNNTLPHPIYPMDSSASAYYGHQHQPQQNPALHNNISSGSVSHRSVDHPLESTLCQDLGMQLPLLNGFGESLSEYPTFSGDDLQTIVQMGFSQNLNRDTAKSSQPQCLKGSNQVAHLKVEL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02225 553 Gene3D - 347 421 IPR036638 GO:0046983
Pte3g02225 553 SMART finulus 356 406 IPR011598 GO:0046983
Pte3g02225 553 Coils Coil 397 417 - -
Pte3g02225 553 MobiDBLite consensus disorder prediction 290 341 - -
Pte3g02225 553 MobiDBLite consensus disorder prediction 236 341 - -
Pte3g02225 553 FunFam Basic helix-loop-helix transcription factor 347 419 - -
Pte3g02225 553 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 240 466 IPR024097 GO:0006355
Pte3g02225 553 MobiDBLite consensus disorder prediction 273 289 - -
Pte3g02225 553 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 420 IPR036638 GO:0046983
Pte3g02225 553 CDD bHLH_AtBPE_like 340 425 - -
Pte3g02225 553 Pfam Helix-loop-helix DNA-binding domain 354 401 IPR011598 GO:0046983
Pte3g02225 553 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 350 400 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02225 Pte-Chr3 40161758 40164680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02225 1 506 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.349 2.63e-112 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte3g02225 HLH 5.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02225 - - zju:107426586 646.736