Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02214 ATGGGGAAGAATGATTTTCTCACCCCAAAAGCTATTGCTAATCGAATCAAAGCTAAAGGACTTCAGAAGTTGCGATGGTATTGCCAGATGTGTCAGAAGCAATGTCGCGATGAAAATGGGTTCAAGTGCCACTGCATGAGTGAGGGTCATCAGCGTCAGATGCAAGTTTTTGGTCAGAATCCAGATCGAATAATTTCTGGGTATTCTGAAGAGTTTGAGAGTGCTTTCCTTGAGCACATGAAGCGAAGCCATCGCTTTAGCCGTATTGCTGCTACTGTAGTGTACAACGAGTATATCAATGACAGGCACCATGTGCACATGAATTCTACACAGTGGGCTACGCTCACTGAATTTGTGAAATATTTGGGTCGGACTGGGAAGTGTAAAGTTGAAGAAACCCCCAAGGGTTGGTTTATAACATATATAGATAGAGACTCAGAGACCCTTTTCAAAGAGAAGATGAAAAATAAAAGAATGAAATTGGATTTGGTAGAAGAAGAAAAGCAGGAGAGGGAAATTAGGAAACAAATTGAAAAGGTTGAGCAGATGATGTCTGGAACAGGGTCTGATCACCCTTCACAGTGTGAATCTGCAAGGGAAATAAAATTGGAAAATGGCGCCAAGATTGGGTTTGCACTAGGTTCAACTTCTAAAATGATTAGCAAGGAGAAAGGTGAGATCTCAAAGGTGGTGTTTGATGATGATGAGAATGAGCTGTATCATGAACAAAGACCAAGTGGCACATCAAAGAAAAGTGAAGGTTGTGGTGGAGGTGGTAAATCAGCTCTGGATGAGTTAATGAGAGAGGAAGAGAAGAAAAAGGAGAAAATCAATAGGAAAGATTACTGGTTGTGTGAGGGAATTATTGTCAAGGTCATGAGTAAAGCCTTGGTAGAGAAGGGTTACTATAAGCAAAAGGGAGTGGTGCGGAAAGTGATTGACAAGTATGTAGGCGAAATTGAAATGTTGGATAGCAAGCATGTGCTTAGAGTTGATCAGCAGGAGCTTGAAACTGTGATCCCACAGGTAGGAGGACGTGTGAAGATAGTGAATGGGGCGTACCGTGGTTCAGTTGCTAAATTATTGGGTGTGGATACAGCTAATTTTTGTGCCAAAGTTCAGATAGAGAAGGGTGCTTATGAGGGCAGGGTACTCAAAGCCGTGGAATATGAGGATATATGTAAAACCGCTCAGTGA 1197 0.4202 MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQVFGQNPDRIISGYSEEFESAFLEHMKRSHRFSRIAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKNKRMKLDLVEEEKQEREIRKQIEKVEQMMSGTGSDHPSQCESAREIKLENGAKIGFALGSTSKMISKEKGEISKVVFDDDENELYHEQRPSGTSKKSEGCGGGGKSALDELMREEEKKKEKINRKDYWLCEGIIVKVMSKALVEKGYYKQKGVVRKVIDKYVGEIEMLDSKHVLRVDQQELETVIPQVGGRVKIVNGAYRGSVAKLLGVDTANFCAKVQIEKGAYEGRVLKAVEYEDICKTAQ* 399
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02214 398 Gene3D - 60 160 IPR038254 -
Pte3g02214 398 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 396 IPR037321 -
Pte3g02214 398 MobiDBLite consensus disorder prediction 240 265 - -
Pte3g02214 398 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Pte3g02214 398 FunFam DNA/RNA-binding protein KIN17, putative 341 397 - -
Pte3g02214 398 Gene3D - 287 340 - -
Pte3g02214 398 Gene3D - 341 397 IPR014722 -
Pte3g02214 398 Coils Coil 154 183 - -
Pte3g02214 398 Coils Coil 260 280 - -
Pte3g02214 398 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Pte3g02214 398 SMART Kin17_mid_2 52 178 IPR019447 -
Pte3g02214 398 Pfam KN17 SH3-like C-terminal domain 279 332 IPR041330 -
Pte3g02214 398 FunFam DNA/RNA-binding protein kin17-like 287 340 - -
Pte3g02214 398 CDD KOW_KIN17 343 395 IPR041995 -
Pte3g02214 398 SUPERFAMILY beta-beta-alpha zinc fingers 26 60 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte3g02214 Pte-Chr3 39921842 39924627 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02214 1 397 C2H2 Transcription Factor Family AT1G55460 72.222 0.0 591